Manihot esculenta (cassava): 110623585
Help
Entry
110623585 CDS
T05761
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110623585
Spliceosome [BR:
mesc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110623585
Other components
Complex C specific factors
110623585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Serglycin
Motif
Other DBs
NCBI-GeneID:
110623585
NCBI-ProteinID:
XP_021624271
LinkDB
All DBs
Position
9:33232763..33238355
Genome browser
AA seq
871 aa
AA seq
DB search
MDDYQEMERFGMDNDFEDGQWINGEFFYRSRKERRKQTKDDVLYGVFADYSDSDDEDGNG
SSSRKRRKDRDFGRKPDLTKPVNFVSTGTVMPNQEIDKNSKEENVDDMFAEDNDRPGLGS
GSGSGLGFGTGLGFNNSNNTVKKSEGFEDDGDQDEDNFLPTEFGRRIKEGAQRRERERLE
KHGKEGGKKREVGTEGVGVFEKHTKGIGMRLLEKMGYKGGGLGKNEQGIVAPIEAKMRPK
NMGMGFNDFKETSAKLPQVEEIKSVTHSQSQSQIVGRAKEKLWVKGRKKKQEEYMTAEEL
LAKKEEQGFEVIQKVLDMRGPQVRVLTNLENLNAEEKAIENDIPMPELQHNVRLIVDMAE
LDIQKIDRDLRNERETAISLQKEKEKLEMDATRQKKQLDNMEEIMNMLSHIEEQNSSGIL
TLDLLAKCFTDLRRKFADDYKLCNLSSIACSFALPLFIRVFQGWDPLRNPLHGLELVELW
KNVLQGDESNDIWDVGTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFFESWERLLPA
SVIQSILDNVVLPKLSSAVDLWDPRRETVPIHVWVHPWLPQLGQRLEYLYEKIRMKLSMV
LGAWHPSDASAYAILSPWKTVFDSASWENLMRKFIVPKLEVALQEFQINPADQKLDQFYW
VISWASAIPIHLMVDLMERFFFVKWLQVLYHWLCSNPNLQEVHKWYTGWKGLLPPELQAH
ENIRYQFTLGLNMIDRAIEGMEVVQPGLRENLSYYRALEQKQFEAQQRATSHAQQQPVMG
VGSSVQADGVGGGLEMTLKEIVEAHAQDHGLLFKPKPGRTYDGHQIYGYGSISIYVDSVH
QRLYAQKEEEWFLTNLDKLLEMHNNSLTKRR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggacgattaccaggagatggagagatttgggatggataacgactttgaggacggccaa
tggataaacggcgagttcttctaccggagtcgcaaagagaggcgcaagcaaaccaaggat
gatgttctgtatggtgttttcgccgactattccgattccgatgatgaagacggcaacggc
tcatcttcgcggaagcggagaaaagaccgtgattttggccggaagcctgaccttactaag
cccgtcaatttcgtatctacaggtaccgtgatgcctaaccaagaaatagataagaactcg
aaagaagagaatgttgatgacatgtttgccgaagataatgacaggcctgggttaggttca
ggttcagggtcggggctaggatttggcaccggattaggatttaataatagcaataatact
gtaaaaaaaagtgaggggtttgaggatgatggtgatcaggatgaggataattttttgcct
accgagtttgggaggaggatcaaagagggagcacaaaggagggagcgggagcgattggaa
aaacatggaaaggaaggagggaaaaagagggaagtcggaactgagggtgttggggtgttt
gagaagcataccaaagggattgggatgagactgttggagaaaatggggtataagggaggt
ggattagggaagaatgagcaagggattgtggccccaattgaagcgaagatgaggcctaag
aatatgggaatgggtttcaacgattttaaagaaacatcagctaagttgcctcaggtggag
gaaattaagagtgtgacacatagccagagccagagtcagattgtgggcagagcaaaggag
aagctctgggtgaaggggaggaagaagaagcaagaggagtatatgacagcagaggagttg
ttggcaaagaaggaagaacaaggttttgaggttatacagaaggtgcttgatatgcgagga
cctcaagtgagagtgctgacaaatttggagaatctgaatgcagaagagaaggcaatagaa
aacgatattccaatgccagaacttcagcacaatgtgaggttgattgtggacatggcagag
ttggacattcagaagattgatagggatttgagaaacgagagggagacagctattagcttg
cagaaggagaaggagaaattggaaatggatgctacacgtcaaaagaaacaattggataac
atggaggaaatcatgaatatgttgagccatatcgaggaacaaaattcctctggaatcttg
accttagatttgttagcaaagtgttttactgacctgcggaggaaatttgcagatgattac
aagctttgcaacttgtctagcattgcttgttcatttgctttgcctttgtttattagagta
tttcagggatgggatcctctcagaaatccgttgcatggactggaacttgtggaattgtgg
aagaatgtgttgcaaggtgacgaaagtaatgatatttgggatgtaggcacaccatattca
caattagtatctgaagtagttttacctgctgtaagaatagctggtattaatacttgggaa
cctagggatcctgaacccatgcttagattttttgaatcatgggaaaggttgttgcctgca
tcagttattcagagcatattagataatgtagtcctcccgaaattgtctagtgctgtggac
ttgtgggaccctcgtcgggaaactgttccaatacatgtttgggtgcatccatggctgccg
cagttgggacagagattggagtacttgtacgagaagatacgtatgaaattgtctatggtt
cttggtgcttggcatcctagtgatgcatctgcttatgctatattgtcgccttggaaaact
gtgtttgattcagccagttgggaaaatcttatgcgcaaatttatagttccgaagttggag
gttgcactgcaagagttccaaataaatcctgctgatcagaagcttgatcaattctattgg
gtcatatcatgggcttctgcaatcccaattcatctcatggttgatttgatggagagattt
ttctttgtcaagtggctacaggttctatatcattggttgtgttcaaatccaaacttacag
gaggttcataaatggtatacaggttggaagggacttctgccaccggagcttcaggctcat
gaaaatattcgatatcaatttactcttggccttaacatgattgatcgggccattgaaggt
atggaagtcgtccaacctggcttgagggagaatcttagttattatagggcactagaacaa
aagcagtttgaggctcagcagagagctacatcacatgctcaacagcaacctgtgatgggt
gtgggaagctcagtccaggcagatggtgtgggtggtggtcttgagatgactttgaaagaa
attgttgaggcccatgcacaagatcatggcttgctatttaagcctaaacctggcaggaca
tacgatggtcaccagatttatggctatggtagcataagcatatatgtggactctgtgcat
caaaggttgtatgcccagaaggaggaagaatggttcctgacaaacctcgataagttgctt
gagatgcataacaattctcttacaaagagacgctga
DBGET
integrated database retrieval system
