Manihot esculenta (cassava): 110624029
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Entry
110624029 CDS
T05761
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110624029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110624029
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110624029
Membrane trafficking [BR:
mesc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110624029
Atg1 complex
110624029
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110624029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
110624029
NCBI-ProteinID:
XP_021624776
LinkDB
All DBs
Position
1:complement(1675502..1682072)
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AA seq
622 aa
AA seq
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MDSHSNSHTESGKLEQIISQFLLKSLHIILDSRIPSLHPHDRNDDFQSGSRVRKSDRWFN
LVLGDRPAALDNLNFWQRNVMDPMIIDIILVREGTTSSLVDNLYSSVAERRPIETVIERW
VVQYKTQRVMSPQTGESSASYKKIYKKSIILLRSLYSQMRLLPAYRIFRQLSSYSQTYNF
DIIYKVSSFCEPFSRSEEEMMKEYSFMPVEALFGHLSLSVNYRPSLSDFNLEPLATFPPK
IITDYVGSPTTDPLRSFPSSERGVGATSFPLRGIRPPTSTPFQRPHSWTSGFHRPPPFMA
NQTFGGSPPAYPTSPMPYDFSYTPADSYGNRLQSYRPTTHSKNTGIDEYQLSPPFSPSVS
PSTPTYFPGASPLQTLFTSETAPVTIPLPLTGRSAKYLSPNFSDPNKNSLPPLSPKSTRY
DTSSQESPSGIRSIRKSESLRTGGGESNPGLVNHYSGHKILKDSKDDSGRLSGLLSSSGS
PRIGISRSSSRLSFQDDLEDCDFSCPFDVDDVDISDSPNSQNLDGKKNLESTPHSLLMGK
KSQDAAVGVLVRMLRTAPPLRQDPSCYSSKSLRTDGDEGIATASEFFMPRKTADALEELK
SYREMKDLLLSKSGTRLISKEA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcacagtaactctcataccgaatctggaaaattggaacaaattatttcccag
ttcctgttgaagagcttgcatattattttggactctagaattccctctcttcacccacat
gatcgtaatgatgactttcaatccggttctcgggtgagaaagagtgacagatggttcaat
ttagttctaggagatcgtcctgctgcattagataacttgaatttttggcaaagaaatgta
atggacccaatgataattgacataatacttgttcgtgaggggactacttcttctttagtg
gacaatctatactcttctgtggctgagaggagacccattgagacagtaatagagaggtgg
gtagttcagtataagacccagcgggttatgtctccacaaacaggggaaagttctgcctct
tacaagaagatatataagaagtcaatcatacttctacgttctctttattcgcaaatgagg
cttctcccagcttatcggatctttcggcagctaagctcatatagtcagacttataatttt
gatatcatatacaaggtttcttcattttgtgaaccattttctaggtcagaggaggaaatg
atgaaagaatatagttttatgcctgtagaggccctttttggccatctttctttatcagtg
aattatcgtccatcactttctgattttaacctggagcctttggcaacattcccaccaaag
attataacagattatgttggtagccctacaactgaccctttgaggtcttttccttcttca
gagaggggagttggtgctacatcctttccactgaggggaatacgtccacctacttctact
ccttttcaacgcccacatagctggacaagtggctttcatagacctcccccttttatggcc
aaccaaacttttggtggatctcctcctgcctacccaacatctcccatgccatatgatttc
tcatatactccagcagattcttatggtaatagattacaaagctatagaccaacaactcat
tcaaaaaatactggtattgatgagtatcagctttcacctccgttctcgccatctgtgtct
ccttccactccaacatacttccccggtgctagtcctctgcaaactctttttacttcagaa
actgcccctgtaactatccctcttccattgacaggcagaagtgctaaatacctttctcca
aatttttctgatccaaataaaaattcacttccacctttatctcccaaaagcacaagatat
gatacttcatcacaggagtctccatctggaatccggtcaatcaggaaatcagaatcttta
aggaccggaggcggagagtcaaaccctggcttagtaaatcattattctggtcataagatt
ctcaaagatagcaaagatgattctgggcgcttgtcaggactgctatcttctagtggttca
ccacgtattggaatttctagaagttctagcagattatctttccaggatgacttagaagat
tgtgacttctcatgtccttttgatgttgatgatgttgatatttcagattcacctaatagt
cagaaccttgatgggaaaaagaatttagagtctactccacattcattactaatggggaaa
aaatctcaagatgctgctgttggtgttctcgtgcgcatgctgaggacagcgcctcctcta
cgacaagatccaagttgttattcatccaagtctttgaggactgacggagatgaaggaatt
gcaactgcctctgagttctttatgcctcggaaaacagcagatgcattagaagagcttaag
agttacagagaaatgaaagacctgctactctctaagagtggaactcggctgatcagcaaa
gaagcttaa
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