KEGG   Manihot esculenta (cassava): 110624044
Entry
110624044         CDS       T05761                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110624044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110624044
   03041 Spliceosome [BR:mesc03041]
    110624044
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110624044
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110624044
Spliceosome [BR:mesc03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110624044
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 Nup35_RRM_2
Other DBs
NCBI-GeneID: 110624044
NCBI-ProteinID: XP_021624794
LinkDB
Position
1:1616006..1621192
AA seq 494 aa
MAKKRKQRSSEPAPVETLVPQLQEVQSLPETIQEEDPQNVAIEDDSGGQQQEPQGVEKEE
REELEQGREDEEKEPEEEDEEGGEGEDKQPEEHHSHNLEVSSSDVAQSNPEIAEANSANE
GASNGNEATEEEENEDDDSLEKLLEPFGKDQLVALLRKSVDKHPDLMDSVREIADADPAH
RKIFVHGLGWDTTAETLKSEFGKYGEIEDCKAVTDRVSGKSKGYAFILFKQRAGARKALR
QPQKKIGNRITSCQLATAGPVPAPPPTTSAVSEYTQRKIFVSNVSAEIDPEKLLEFFRQY
GEIEEGPLGLDKQTGKPKGFALFVYKSVESAKKALEEPHKKFEGHTLHCQKAIDGQKSNK
TGYGAVHHQHHHHQPHYQHTAKKGKYSSGAHGPGHLMAPSGPSVNFSPGMAPQGLNPALG
QALTALGLGNLLGGLGGAPVNMGGPPAGYGNQAGGGYAIEPGMQGGYPNLQMNPHMGQSG
AGRAQQGSAPYMGH
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggcgaagaaacgaaagcagcgatcctctgaacccgcacccgttgaaacccttgttccg
cagcttcaagaggttcaatcgctgcctgaaacaatccaggaagaagaccctcaaaacgtg
gccatagaagatgattccggaggacaacaacaagagcctcaaggagtagagaaagaggag
cgagaagaacttgagcaagggagagaagacgaagaaaaagaaccagaagaagaagacgaa
gaaggaggagaaggagaagataaacaaccggaagaacatcactctcataacctagaagtc
tcatcaagtgatgtagcacagtcaaacccagaaatagctgaagccaatagtgctaatgaa
ggtgctagtaatggaaacgaagcaactgaggaagaggaaaatgaagacgacgactctcta
gagaagcttctagagcctttcgggaaagaccaactggttgccctcctcagaaagtccgtg
gacaagcatcctgatttgatggattctgtgcgtgaaattgcggatgctgaccccgctcac
cgcaagatctttgtgcacggtctcggctgggataccactgctgaaaccctcaaatctgag
tttgggaagtacggggagatagaggactgtaaggccgtgaccgaccgtgtttcagggaaa
tctaaaggctatgcctttatattattcaagcagcgagctggggcacgaaaagccctcagg
cagccccagaaaaagataggtaataggattacgtcctgtcagttggccactgcagggcct
gtaccagctccacccccaactacgtcagcagtgtccgagtacactcagaggaagattttc
gtaagcaatgtatcagctgagatagatcctgagaagcttctggagttctttaggcagtac
ggggagattgaggaaggtccacttgggcttgataagcagaccggaaaacccaaggggttt
gcattattcgtgtataagtcagttgagagtgcaaagaaggcacttgaggagcctcacaag
aagtttgagggtcatacgctgcattgccagaaggccatagatgggcaaaaatcaaacaag
acgggttatggtgcagttcaccatcagcatcaccatcatcagccacattaccagcacaca
gccaagaaaggtaagtactcgtctggtgcacacggccctggtcatttgatggcaccgtct
gggccatctgtgaacttcagtccgggaatggcaccccaaggtttgaacccggcgcttggg
caggccttaacggctttggggcttggtaatctgcttggagggcttggtggtgcaccagtg
aatatgggggggccgcctgctggatacggtaatcaggctggtgggggatacgcgattgaa
ccaggtatgcagggtggatatccgaacctacagatgaaccctcatatgggacagagcggt
gctggcagagctcaacaaggcagtgctccttacatgggacattag

DBGET integrated database retrieval system