Manihot esculenta (cassava): 110624105
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Entry
110624105 CDS
T05761
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110624105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110624105
03036 Chromosome and associated proteins [BR:
mesc03036
]
110624105
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110624105
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110624105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110624105
NCBI-ProteinID:
XP_043805750
LinkDB
All DBs
Position
1:complement(19760..28273)
Genome browser
AA seq
1047 aa
AA seq
DB search
MFGSTTAFGQSSSSPFGSQTVFGQTSNANNNPFAPKPFGSTTPFGSQTGGSIFGGTSTGM
FGTPQTSSPFSSTPFGASSSPAFGSTMPTFGGSSSTSAFGNSSTSFGGSSVFGQKPAFGG
FGSTTQTSPFATTSQQSQPTFGSSLFGSTTPFGASSQPAFGSTGSPFGSSSTPSFGTSST
PGFGASTPSFGTTSAFGSTASPAFGTGTGFGASSTPVFGSGGSFATSSTPAFGASGAPGF
ATSSTPAFGASTTPAFGASTTPVFGASTTPAFGSTPAFGTSSTPSFSFASSPGFGQSVSA
FGSSPFGTTTSPFSSQSSPFGSQATTATFGNPGFGQSAFAGNRGGSRAVAYSATAETDSS
GGQPGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPPGQASAGNNFGVSSAPANPFA
PSNAFTQSSSSPFSSTISSNPFSTKPFGTSSTPSFSPSPFTATPSSNPFQSTSAFPSTSS
TAFPGSAVPSLFGTSSSSAFGSSPSLFNTSTGQTSSSLFGNFANTQPSLSFPSTAPSIGQ
TGSAFGQATSAFAPSTTPSFTQSSIFNTPSGFAFSSTSSLMSSTNQGVFGQASLSQSTPF
QLSQPSQATSLPGFGNFGQSQAAGTSGFAGSSSIFGQSTFGQLSNIQSSAAVQPAPVTNP
FGTLPAMPQMSIGRAGTAPSVQYGISSMPVVDKPAPVRISSLLTARHLSQRRIRLPTRKY
NQKHDGPKVPFFSDEEETTSTPKADALFIPRENPRALVIHPTDQWPMRANAEKASPLRDA
STPVYENGKHSETVDVPSSSGAGGKDKNVVDGFGKEPVYFKLNQKPNGVHEDKEAQKEES
YMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRHVKDF
VVGRHGYGSIKFLGETDVRRLDLESLVQFNNREVIVYTDDTKKPPVGQGLNKPAEVTLLN
IKCFDKKTGRQYTEGPKIEKYKEMLKRKAEDQGAEFVSYDPIKGEWKFRVNHFSKYSLGD
EEEEEEEEEEEEEEEDWVVVHSARGFC
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctactactgcttttgggcagtcatctagtagcccctttggttcccaaaca
gtatttggtcaaacaagtaatgccaacaataatccgtttgctcctaaaccctttggtagt
acaactccttttggttcacaaacagggggctccatttttgggggaacttcaactggcatg
tttggtaccccccaaacttcctcacctttctcttccactccttttggcgcttcatcttca
ccagcatttgggagcactatgcctacatttggaggttcttcttctacatctgcttttggt
aattcatcaacttcatttggtggatcttctgtctttggccagaaacctgcttttggaggc
tttgggtctactactcaaacaagtccatttgcaactacaagtcagcaatcacagcctact
tttggtagcagcttatttggttctaccacaccttttggtgcatcaagtcagcctgctttt
ggttcaacaggttctccctttggttcttccagcacgccttcctttggtacaagcagcact
ccgggctttggtgctagcactccatcctttggtaccacaagtgcatttgggtcaacagcg
agtccagcatttggtacgggaactggatttggcgcgtccagcacaccagtatttggatct
gggggcagctttgcaacttcaagcacccctgcttttggtgcttcaggtgctcctggattt
gcaacttctagcactcctgcctttggggcttcaactactcctgcctttggggcttcaact
actcctgtctttggggcttcaacaactcctgcctttgggagtacccctgcatttgggact
tcaagtactccatcctttagctttgcatccagcccaggttttggccagtcagtgtctgca
tttggaagcagtccatttgggactactacatctccctttagttcccagagttcaccattt
ggatcccaggctacaacagcaacatttgggaaccccggatttggccagtctgcatttgcc
ggaaatcgtgggggtagcagagcagtggcttactcggcgacagctgagacagacagtagt
ggtgggcagcctggaaagttagagtcaatatcagcaatgcctgtgtacaaagataaaagc
catgaggaactgagatgggaagattatcaattaggagacaaaggtggaccacttcctcct
ggtcaagcctctgctgggaataactttggtgtctctagcgcaccagcaaatccttttgct
ccttcgaatgcatttactcagtcatcttctagtcccttttcttcaacaatttcctccaac
ccgttttctaccaaaccttttggaacctctagtacaccttcattcagtccttcacctttc
actgcaacaccgtcatctaatccttttcagtcaacctcagcttttccgtccacttcatcc
actgcatttccaggcagtgcagttccatctctttttggcacatccagctcctctgcattt
ggttcatcaccatccttgtttaatacaagcacaggacaaacaagttcatcactatttgga
aattttgcaaacactcagccatctctctcattcccatccactgcaccttcaattggccag
acaggttctgcttttggacaggctacctccgcttttgctccgagtaccaccccttctttt
acccaatctagcatcttcaatactcctagtggttttgcattctctagcacttcatctctg
atgtcttcgaccaaccaaggggtgtttggtcaagcaagtttgtctcagtctactcctttt
caactctctcaaccttctcaggctacaagtctccctggctttggcaattttggtcagtca
caagcagctggcacaagcggatttgctggttcatcaagcatctttggtcagagtactttt
ggacaattgtctaatattcagagttctgctgctgtacagccagcacctgttacaaatcca
tttgggacactacctgcaatgcctcaaatgtctattggtcgagctgggactgcaccttca
gttcaatatgggatttctagcatgcctgtggttgacaaacctgctcctgttagaatatca
tccttgctgactgctaggcacctgtcacaaagacgaatcaggttacccacaagaaaatat
aatcaaaagcatgatggtccaaaggttccattttttagtgatgaagaggaaaccaccagc
acgccaaaggcagatgctctctttattcctcgggaaaacccaagagctctagtcattcat
cctacagaccagtggcccatgagggccaatgcagaaaaagcttctccactgagagatgca
tccacgccagtgtatgaaaatggcaagcattcagaaactgttgatgttccatcctcaagt
ggtgctggtggtaaagataagaatgtagttgatgggtttgggaaggaaccagtttatttt
aaactcaatcagaagcctaatggagttcatgaggacaaagaagctcagaaagaggagtcg
tatatgacgcttagtggtcatagagcgggtgaagctgcaatagtttatgaacatggggct
gatattgaagcactaatgccaaaactccgaagatctgactactacacggagcctcgaatc
caagaattggcagctaaggaaagggctgaaccggggttctgccgccatgtcaaggacttt
gtggttggacgacatggttatgggagcattaagttcttgggtgagacagatgttcgccgg
cttgatctggagtcccttgtgcaatttaataatcgggaggttattgtgtacacagatgac
acgaagaaaccacctgttggacaaggtctcaataaacctgctgaggtaacacttcttaac
ataaaatgctttgacaagaagactggacgtcagtatacagaaggcccaaaaattgagaaa
tacaaggagatgcttaagaggaaggctgaggaccaaggtgctgaatttgtgtcatatgac
cccattaaaggagaatggaaattcagggtgaaccatttcagcaagtatagcctgggagat
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagactgggtggttgtg
cattctgctagaggcttttgttaa
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