Manihot esculenta (cassava): 110624128
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Entry
110624128 CDS
T05761
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03440
Homologous recombination
mesc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110624128
03460 Fanconi anemia pathway
110624128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesc03032
]
110624128
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110624128
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
110624128
DNA replication proteins [BR:
mesc03032
]
Eukaryotic type
DNA Topoisomerases
110624128
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110624128
FA (Fanconi anemia) pathway
110624128
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
110624128
NCBI-ProteinID:
XP_021624928
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All DBs
Position
1:complement(1904315..1944801)
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AA seq
862 aa
AA seq
DB search
MAPSSVLMVAEKPSIALSIASVLSGGRMFTKRGSTEVHEFDGTFLGFPAHYKVTSVIGHI
FSVDFPSKYQDWTVTDPTDLFQAQIVKTETNPKAHICRHLSQEARGCGHLVLWLDCDREG
ENICFEVIECTGFRVNDARRRVYRARFSSVTEKDIFKALDNLAQPNRDEALAVDARQEID
LKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGYCVQRYLQIATFKPEKFWAVQP
HIIVDGYELQLEWERHKLFDLDVAMMFQKQVIQDGILEVIDISEKQENYSRPPGLNTVNL
LKVASSALGIGPQTAMQLAERLYTQGFISYPRTESTAYPSSFDFKSTLGAMSNNSTWGNY
VRRLLADGYHKPRLGTDVGDHPPITPIQLASENMLGKDAWRLYQYVCQHFIASVSPDCKY
VRTKVEFSVGGEFFHCIGKRVTVEGFTCIMPWLAVSEKNLPQFTIGEKIEVSKVDLYEGK
TVPPDYLSESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRRLVPTTLGITLIRG
YQCIDPDLCLPDIRSFIEQQITLIAKGQVDHSRLVQHVLQQFKQKYCYFVKQIDKMDSLF
EAQFSQLFDSGRVLSKCGKCLRYMKYISALPSRLYCGTCEDVYFLPQKGTIKLYKELTCP
LDNFELLLFSMGGPEGKTFPLCPYCYNSPPFEGIDKLFGASESGNFGKLGKGAGMPCFLC
PHPTCRHSLIAQAVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVLLPQGAHRIATTRER
CPECDSTIIEVDFNKNTTPLEDGATLHIGCILCDDLLHSLVEVKHGKSFFKRMGRGGRGR
GRGGRGRASARRGDPRMSFRDF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggctccttcatcagttctcatggttgcagaaaagcccagtattgctctatcaatagct
tctgtactctccggtggtcggatgttcaccaagaggggtagtacagaggtccatgaattt
gatggaacatttcttggatttcctgcacattataaggtgacatcagttattgggcatatt
ttcagtgtagattttccatcaaaatatcaagattggacagtcactgatcctacggatctt
tttcaagctcaaattgttaagactgaaacaaaccctaaggctcatatttgtaggcattta
agccaagaagctcgtggctgtggtcatttggtattatggttggactgtgatcgtgaggga
gaaaatatatgctttgaagtgattgaatgtactggttttcgcgtaaatgatgctagaaga
agggtatatcgtgcacggttttcttcagtaactgagaaagacattttcaaggctctggac
aaccttgctcaacccaacagagacgaggcattggctgtagatgcacggcaagagatagat
ttaaaagttggcgttgctttcacaagatttcaaactagctttttccagggaaagtacggg
aatcttgattcaagagttatctcctatgggccttgtcaaacacctacccttggctattgt
gtacaacgttatttgcaaattgcaacttttaaaccggaaaagttttgggctgtgcaacct
cacataattgttgatggctatgaacttcaactagaatgggagcgtcacaagttatttgac
ttagatgttgctatgatgtttcaaaagcaggtaatacaggatggaatattagaagtgatt
gatatatcagagaaacaggaaaactatagtcgccctcctggtctcaacactgtcaacctt
ctaaaggttgcttcgagtgcattaggcattggacctcaaacagccatgcaattagctgaa
cgcttgtacactcaaggatttatcagttatccacgtacagaaagcacagcctacccttcc
tcatttgacttcaaaagcacacttggtgcaatgtcaaacaattcaacatggggtaactat
gtccggagattgcttgctgatggttatcacaaaccgcgattaggaactgacgtaggtgac
catcctcctattactccaatccaattagcaagtgagaatatgctaggcaaagatgcttgg
agactatatcagtatgtctgtcaacattttatagcatctgtgtctcctgactgcaagtat
gtgaggacaaaggtggaattttctgttgggggagagttcttccattgtataggcaagcgt
gttacagtagaaggatttacctgtatcatgccatggttggcagtaagtgagaaaaatctc
cctcagtttacaattggtgagaaaatagaagtttcaaaggtggatctctatgagggcaaa
actgttcctccagattacctcagcgagagtgagctgatttctctgatggagaagaatgga
ataggcacagatgcatcaatacctgtacatataaacaatatatgcgaacgtaattatgtg
caggtacaagctggcaggaggttggttccaactacattaggtatcaccctgataagaggc
tatcagtgtattgatccggatctatgtttacctgacattcgtagtttcattgagcaacag
attacacttattgccaagggccaggtggatcattcgcgtcttgtgcagcatgtactccaa
caattcaagcaaaaatattgttactttgttaagcagattgacaagatggactcgttgttt
gaagcacagttttctcaactttttgactcaggccgtgttcttagtaaatgtggaaagtgc
ctgaggtacatgaagtacatttcagctctaccatcacgtctttattgtggtacatgtgag
gatgtttattttcttcctcagaagggcaccatcaagctatacaaggaactaacatgccct
ttggacaactttgagctgttgctattctccatgggtgggccagaagggaagacgttccca
ctttgtccatattgctacaatagtcccccatttgaaggcatagataaattgtttggtgca
agtgagagtggtaattttggcaagctaggaaagggagcaggcatgccatgcttcctctgc
ccccacccaacgtgccgacattctctgattgctcaagcagtttgtgcttgcccagaatgc
agtggaacgcttgttttggacccagtaagtgcacccaagtggagactttattgcaatatg
tgcaattgccttgtcttgctccctcagggtgctcatcggatagccactactagggaacgt
tgccctgagtgtgattcaacaatcatagaagtggacttcaacaagaacacaacaccattg
gaagatggagctactttgcacattggttgcattctttgtgatgatttacttcattcactt
gtggaggtgaagcatggtaaatcatttttcaaacgcatgggtaggggaggaagaggaagg
gggagaggtggaagaggacgggcttctgcaaggagaggggatccgagaatgagctttcgg
gatttctaa
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