Manihot esculenta (cassava): 110624485
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Entry
110624485 CDS
T05761
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110624485
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mesc04812
]
110624485
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
110624485
Microtubules and associated factors
gamma-tubulin ring complex
110624485
Cytoskeleton proteins [BR:
mesc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
110624485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_HPS5
NYD-SP28_assoc
Beta-prop_DCAF12
NBCH_WD40
PsbK
Motif
Other DBs
NCBI-GeneID:
110624485
NCBI-ProteinID:
XP_021625355
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Position
10:2183861..2192576
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AA seq
796 aa
AA seq
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MMNLADPSMGLLAASGGDTIKLFDVSGEPGDPCILSYTPSPGCLVNSVKWNHTNLVVASA
GEDKKISLWRKNGQSMGTIPVAGTDSGDNIEESILAISFSNKGSRYMCSGGSGQVVRIWD
LQRKRCIKWLRGHTSTITGALYNCKDEHLASISLSGDLILHNLASGARATELKDPHEQVL
RVLDYSRISRHLLVTAGDDGSVHLWDTTGRSPKISWLKQHSAPTAGIGFSPSNDKLIASV
GLDKKLYTYDSGSRRPSSCISYEAPFSSLAFREDGWILAAGTSSGRVVFYDVRGKPQPFT
VLRAYGSSEAVTSLCWQRSKPVVVNESTCTAETALLGGAVEDSVLMPDPLPSVTSSSVSL
STAVSSSRNLGRSGLSVEASSLPSTSSETALSMPSFAEETPHRSHLWPSGKLSRLHAPRT
SYNFKDDMEVFSPLVDVQPITPSLSKLWDDHAAMKQDNISIDKKSSSLLFPSAGRRFPFP
EDGTNDHPIFDWKASSTSKQEETRSSFSLLGGSTPAPSSKSEDSSITPPEAWGGEKLSDK
LTHLRQPLNLPSRFGMLTSGVLHDLPSSASTSQTIINSLTNSNTSFSNLRPRDVSSTQES
SSGFSELISSSSITQSLSTKSIIGQTNLDVPGSGSLTLPRRFSTYAERISTASSLSDGNS
ISVGSPKIKKTGAETREELLSSLLSRSDTSAVTEQGILPAVNGGISQPNKALQLDSQQGN
SFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQEMEFSSVMSSILENQAELMK
EIKSLRKENQELRQLL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttggcggatccatcaatggggctactggcggcgagcggaggcgacactatt
aaactttttgatgtttcgggggaaccgggagatccctgcatcttgagctatactccgtct
ccggggtgcctggtcaactcagtcaagtggaaccacactaatttggttgtggctagtgct
ggagaagataagaagatctccctctggaggaaaaatgggcagagcatgggaactattcca
gttgctgggacagatagtggagacaacattgaggaatctatattggctattagctttagt
aacaagggatccagatacatgtgctctgggggaagtggtcaagtagtaagaatctgggat
ctacaaaggaagcgctgtattaaatggttgaggggtcacaccagtacaataactggtgct
ttatacaattgcaaagacgagcatttggcttcaatcagtctaagtggggatcttatcctt
cacaatcttgcatctggtgcaagggcgacagaactcaaggatcctcatgaacaggtactg
cgggtgctagactattcccgtattagccgccaccttttggtgaccgcaggggatgatggc
tcagtacatttgtgggatacaactggtcgcagcccaaagatttcttggttgaagcaacat
tctgctccaactgctggtattggcttctcaccatcaaatgataagctaatagctagtgtt
ggactggataaaaaattatacacttatgattctgggtctaggagaccatcatcttgcata
tcttacgaggcacctttctcttcattggcattcagagaggatggctggattctggctgct
ggaactagcagtggtcgagtggtgttctatgatgttcgtggaaaaccacagccttttact
gttcttcgtgcttatggcagttcagaggctgttacaagtttgtgctggcaaagatcaaaa
ccagttgttgtaaatgagagcacctgcactgctgagacagctcttctgggaggtgctgtt
gaagattccgttcttatgcctgatcctcttccctctgtaacatcatcaagtgtttcacta
tctacagcagtgtcgagttctcgtaatcttggtcgttctggtctttctgtggaagcatca
tctcttccatcaactagtagtgaaactgcattgagtatgccttcttttgcagaggaaaca
ccacatcgaagccatctgtggccaagcggaaagctttcaagattacatgctcctcgtaca
agttataattttaaggatgacatggaagtgttttcccctcttgttgatgtccagcctatc
acaccttcactttctaagctctgggatgatcacgcagcaatgaaacaagataatatatca
attgataagaagtcctcatctttgttgtttccttcagctggtagaagatttccttttcca
gaggatgggacaaatgatcatccgatattcgattggaaagccagttcaacttccaaacag
gaggagaccagatcttctttttcactattggggggatctactcctgctccatcttcaaaa
agtgaggattcctccatcactcctccagaagcttggggtggagagaaactatctgacaaa
cttacccacttacgacagccactcaatttgccttctcgttttgggatgttgacttctggg
gtcttgcatgatcttccttcttcggcttcaacgagtcagacaattattaactctttgaca
aattcaaacacaagtttttcaaatctgcgcccaagagatgtttcttcaactcaggaaagt
tcatcaggattttcagaactcatttcctctagttccataactcaatctctgagtacaaaa
agcatcattggacaaaccaaccttgatgttccaggatcaggctctttgactcttcctcgt
agattttcaacttatgctgagagaataagcacagcttcttccttaagtgatgggaattca
atttcagtgggttctcctaaaattaagaaaacaggtgctgaaaccagggaagagcttttg
agtagcttgttatcaaggtctgacacatcggctgtgacagaacaagggattcttccagca
gtaaatggaggaatctcacaaccaaataaagcccttcagcttgattcacagcagggaaat
tccttcacgctccagctttttcaacgtactcttgaagaaactcttgattctttccagaaa
tccatccatgaagacatgaggaaccttcacattgaaattctaagacaattccatatgcag
gagatggaattttctagtgttatgagctcaattctggaaaatcaggcagagctgatgaag
gaaatcaagtcgcttcggaaagaaaaccaggagcttcgccaattactttga
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