KEGG   Manihot esculenta (cassava): 110624485
Entry
110624485         CDS       T05761                                 
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mesc03036]
    110624485
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mesc04812]
    110624485
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     110624485
   Microtubules and associated factors
    gamma-tubulin ring complex
     110624485
Cytoskeleton proteins [BR:mesc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     110624485
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st EIF3I Beta-prop_HPS5 NYD-SP28_assoc Beta-prop_DCAF12 NBCH_WD40 PsbK
Other DBs
NCBI-GeneID: 110624485
NCBI-ProteinID: XP_021625355
LinkDB
Position
10:2183861..2192576
AA seq 796 aa
MMNLADPSMGLLAASGGDTIKLFDVSGEPGDPCILSYTPSPGCLVNSVKWNHTNLVVASA
GEDKKISLWRKNGQSMGTIPVAGTDSGDNIEESILAISFSNKGSRYMCSGGSGQVVRIWD
LQRKRCIKWLRGHTSTITGALYNCKDEHLASISLSGDLILHNLASGARATELKDPHEQVL
RVLDYSRISRHLLVTAGDDGSVHLWDTTGRSPKISWLKQHSAPTAGIGFSPSNDKLIASV
GLDKKLYTYDSGSRRPSSCISYEAPFSSLAFREDGWILAAGTSSGRVVFYDVRGKPQPFT
VLRAYGSSEAVTSLCWQRSKPVVVNESTCTAETALLGGAVEDSVLMPDPLPSVTSSSVSL
STAVSSSRNLGRSGLSVEASSLPSTSSETALSMPSFAEETPHRSHLWPSGKLSRLHAPRT
SYNFKDDMEVFSPLVDVQPITPSLSKLWDDHAAMKQDNISIDKKSSSLLFPSAGRRFPFP
EDGTNDHPIFDWKASSTSKQEETRSSFSLLGGSTPAPSSKSEDSSITPPEAWGGEKLSDK
LTHLRQPLNLPSRFGMLTSGVLHDLPSSASTSQTIINSLTNSNTSFSNLRPRDVSSTQES
SSGFSELISSSSITQSLSTKSIIGQTNLDVPGSGSLTLPRRFSTYAERISTASSLSDGNS
ISVGSPKIKKTGAETREELLSSLLSRSDTSAVTEQGILPAVNGGISQPNKALQLDSQQGN
SFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQEMEFSSVMSSILENQAELMK
EIKSLRKENQELRQLL
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgatgaatttggcggatccatcaatggggctactggcggcgagcggaggcgacactatt
aaactttttgatgtttcgggggaaccgggagatccctgcatcttgagctatactccgtct
ccggggtgcctggtcaactcagtcaagtggaaccacactaatttggttgtggctagtgct
ggagaagataagaagatctccctctggaggaaaaatgggcagagcatgggaactattcca
gttgctgggacagatagtggagacaacattgaggaatctatattggctattagctttagt
aacaagggatccagatacatgtgctctgggggaagtggtcaagtagtaagaatctgggat
ctacaaaggaagcgctgtattaaatggttgaggggtcacaccagtacaataactggtgct
ttatacaattgcaaagacgagcatttggcttcaatcagtctaagtggggatcttatcctt
cacaatcttgcatctggtgcaagggcgacagaactcaaggatcctcatgaacaggtactg
cgggtgctagactattcccgtattagccgccaccttttggtgaccgcaggggatgatggc
tcagtacatttgtgggatacaactggtcgcagcccaaagatttcttggttgaagcaacat
tctgctccaactgctggtattggcttctcaccatcaaatgataagctaatagctagtgtt
ggactggataaaaaattatacacttatgattctgggtctaggagaccatcatcttgcata
tcttacgaggcacctttctcttcattggcattcagagaggatggctggattctggctgct
ggaactagcagtggtcgagtggtgttctatgatgttcgtggaaaaccacagccttttact
gttcttcgtgcttatggcagttcagaggctgttacaagtttgtgctggcaaagatcaaaa
ccagttgttgtaaatgagagcacctgcactgctgagacagctcttctgggaggtgctgtt
gaagattccgttcttatgcctgatcctcttccctctgtaacatcatcaagtgtttcacta
tctacagcagtgtcgagttctcgtaatcttggtcgttctggtctttctgtggaagcatca
tctcttccatcaactagtagtgaaactgcattgagtatgccttcttttgcagaggaaaca
ccacatcgaagccatctgtggccaagcggaaagctttcaagattacatgctcctcgtaca
agttataattttaaggatgacatggaagtgttttcccctcttgttgatgtccagcctatc
acaccttcactttctaagctctgggatgatcacgcagcaatgaaacaagataatatatca
attgataagaagtcctcatctttgttgtttccttcagctggtagaagatttccttttcca
gaggatgggacaaatgatcatccgatattcgattggaaagccagttcaacttccaaacag
gaggagaccagatcttctttttcactattggggggatctactcctgctccatcttcaaaa
agtgaggattcctccatcactcctccagaagcttggggtggagagaaactatctgacaaa
cttacccacttacgacagccactcaatttgccttctcgttttgggatgttgacttctggg
gtcttgcatgatcttccttcttcggcttcaacgagtcagacaattattaactctttgaca
aattcaaacacaagtttttcaaatctgcgcccaagagatgtttcttcaactcaggaaagt
tcatcaggattttcagaactcatttcctctagttccataactcaatctctgagtacaaaa
agcatcattggacaaaccaaccttgatgttccaggatcaggctctttgactcttcctcgt
agattttcaacttatgctgagagaataagcacagcttcttccttaagtgatgggaattca
atttcagtgggttctcctaaaattaagaaaacaggtgctgaaaccagggaagagcttttg
agtagcttgttatcaaggtctgacacatcggctgtgacagaacaagggattcttccagca
gtaaatggaggaatctcacaaccaaataaagcccttcagcttgattcacagcagggaaat
tccttcacgctccagctttttcaacgtactcttgaagaaactcttgattctttccagaaa
tccatccatgaagacatgaggaaccttcacattgaaattctaagacaattccatatgcag
gagatggaattttctagtgttatgagctcaattctggaaaatcaggcagagctgatgaag
gaaatcaagtcgcttcggaaagaaaaccaggagcttcgccaattactttga

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