Manihot esculenta (cassava): 110624490
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Entry
110624490 CDS
T05761
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
mesc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110624490
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110624490
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110624490
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110624490
03036 Chromosome and associated proteins [BR:
mesc03036
]
110624490
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110624490
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110624490
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110624490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
Htt_N-HEAT_1
PDS5
CLASP_N
TPR_TNPO3_IPO13_3rd
Cnd1
Motif
Other DBs
NCBI-GeneID:
110624490
NCBI-ProteinID:
XP_021625364
LinkDB
All DBs
Position
1:complement(3485804..3494378)
Genome browser
AA seq
587 aa
AA seq
DB search
MATIDEPLYPIAVLIDELKNEDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLIAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVDSLCRIGAQMREQ
DLVEYFVPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKSELRTMYSQLCRDDMPMVR
RSAATNLGKFAATIEPAHLKTDIMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTSSDLVPAYVRLLCDNEAEVRIAA
AGKVTKFCRILNPELAIQRIIPCVKELSTDSSQHVRSALASVVMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTVLHAISLIAPVMGSEITCSTLLPIVINTSKDRVPNIKFNVAKVLQS
IIPIVDQSVVEKMIRPCLVELSEDPDVDVRFFATQALHSTEQVMMSA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaatcgatgagcctttatacccaattgctgttcttattgatgagttaaaaaat
gaggatattcagctccgtttgaactcaattcgtaagctttctacaattgcacgcgcgctt
ggggaggagagaacccggaaggaattgattcccttcttaagtgagaataatgatgatgat
gatgaagtgcttattgcaatggctgaagaattgggggtctttattccttatgttggcggt
gtggagcatgccaatgtgttgctcccaccgcttgagactttgtgcactgttgaggaaact
tgcgtcagagataaagcagtggactccttatgtagaattggggcacagatgagggagcaa
gacttggtcgagtattttgtaccattagtgaagagactggctgctggtgaatggtttaca
gctcgagtttcgtcatgtggcttgtttcatattgcatatccaagtgctcctgagacttta
aaatctgaactgaggacaatgtacagtcagttatgtcgagatgacatgcccatggttcgt
agatctgcagcaaccaaccttggaaaatttgctgctactatcgagcctgcccatttaaag
actgatatcatgtcgatgtttgacgatttgacacaagatgatcaagattctgttcgacta
ttggccgttgagggttgtgcagcacttggaaagttgttggaaccccaagattgtgtggca
catattctccctgtcatagttaatttctcacaggataagtcttggcgagttcggtacatg
gttgctaaccaattatatgagctatgtgaagctgttggccctgaacctaccagttcggat
ctggttcctgcatatgttcggctactttgtgataatgaagctgaagtacgcatagctgct
gcaggcaaagtaactaaattttgccggattttgaacccagaacttgcaatccagcggatt
attccttgtgtaaaggaattgtccacagattcatctcaacatgttcgttctgctttggct
tcagttgtaatgggaatggcaccaattttgggaaaggatgcaacaatagagcaactgcta
cccatttttctctctcttttgaaagatgaatttcccgatgttcgcctaaatattattagc
aagcttgatcaagtcaaccaggtaattggaattgacctgctttcccagtccctattgcca
gcaattgtagagcttgccgaggatagacattggagggtccggcttgcaatcatagaatat
atacctttactggctagtcagttgggtgttggattttttgatgataagcttggtgctctt
tgcatgcagtggttaaaagataaggtttactcgatccgtgatgcagctgctaataatgtg
aagcgccttgcagaagaatttggtccagattgggcaatgcagcacatagttcctcaggtt
ctggacatgattaataacccacactatctatatcgaatgaccgttctacatgcaatttct
cttatcgctcctgttatgggctctgaaattacatgttccacacttcttcccattgtcatc
aatacatcaaaagatagggtacccaacattaaattcaatgtggccaaggtgctgcagtcg
attattcccatagttgatcagtcggtggtggagaagatgattcgtccatgtctggttgag
ctgagcgaggacccagatgttgatgtcagattctttgccacccaagcactacactccact
gaacaggtcatgatgtctgcctag
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