Manihot esculenta (cassava): 110624729
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Entry
110624729 CDS
T05761
Name
(RefSeq) auxin response factor 1 isoform X2
KO
K14486
auxin response factor
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110624729
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
110624729
NCBI-ProteinID:
XP_021625691
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Position
10:26102088..26109271
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AA seq
679 aa
AA seq
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MAFTSTNHTPVGHPHAGGCNDALYKELWHACAGPLVNLPRDGERVYYFPQGHMEQLEASM
HQGLEQHMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEP
ERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNSWHF
RHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQISMPSSV
ISCQSMHLGVLATASHAINTGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKM
RFEGEEVPERRFSGTIVGVGDNMSSGWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV
ASAPSNSQPVQRNKRARPSVLPSPTPNLSALDVWKPPTESPAFSYGDSQRGRDLYPSHNF
STTAKANSLGFSGNSLLSSVSPNSMYWPNRVESVTDSFVPVINKDSGERKQSTGNGYRLF
GIQLVDNSNVEETSPLAVASGMGDDCPIVSLDAESDQNSEPSNINRSEIPSISCEPEKSC
LRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFECYEDLLMKLEDMFDIEGELSGSTKK
WQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLSPKIKLPVNEEIKATKADG
DPDAAVNMEDQSSVVGPGC
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcattcacgagcaccaatcatacacctgttggacatcctcatgcaggaggatgcaat
gatgctctttacaaagaactatggcatgcctgtgccggacctcttgtcaaccttcctcgt
gatggggagcgagtttattattttccacaaggtcacatggaacagcttgaagcttcaatg
catcaagggttggagcaacatatgccatcattcaatcttccatcaaaaattctttgtaaa
gtggtcaatgttcagcgtagggctgaacctgaaacagatgaagtttatgcacagattacc
ctgcttccagaaccagaccaaagtgaggttactagccctgatcctccactaccagaacct
gaaagatgcacagttcattcattttgtaagacacttactgcttctgacacaagcactcat
ggtggtttctctgttcttcgaaggcatgcagatgattgtctgcctcccctggatatgtcc
cagcagccaccttggcaagagttggttgccagtgacttgcatgggaattcatggcatttc
cgacacatttttcggggtcaacctagacgccatctacttacaaccgggtggagtgtcttt
gttagttcaaagaagttagtggcaggagatgcattcatcttcttgaggggagaaaatgga
gaacttcgggttggtgtaaggaggcttatgagacagcagattagtatgccatcttctgtt
atatcttgccaaagcatgcaccttggggttcttgccactgcatctcatgcaattaataca
ggaactcttttttctgtcttctacaagccaagaaccagtcgttctgagttcattgtaagt
gtcaacaagtatcttgaagctcagagccacaagctttctgttgggatgaggtttaagatg
agatttgagggcgaagaagtacctgaacgaaggtttagcggcaccattgttggtgttgga
gataatatgtcgtctggttgggctgattctgagtggagatccttaaaggttcaatgggat
gagccttcttcaatcttgcgtccagatagagtatcaccatgggaattggagccactcgtt
gcatctgctccttcaaactcccaacctgtgcaaaggaacaagcgcgctcggccatctgtt
ttaccttcaccaacgccaaatctgtctgcacttgatgtgtggaaacccccaactgagtct
cctgctttctcatatggggactctcaacgtggacgagatctttatccatctcacaatttc
tctacaactgcaaaggccaactctcttggctttagtggcaatagtctattgtctagtgtc
tcccccaactcaatgtattggcctaaccgggtggaaagtgttacagattcttttgtccca
gttattaacaaagattctggagagagaaaacaaagcactggaaatggttacaggcttttt
gggattcaacttgttgacaactccaatgtggaagaaacttcacctttagctgttgcttca
ggaatgggggatgattgccctattgtgtccttggatgctgaatctgatcaaaattctgag
ccatcaaatattaatcgatctgaaatcccttcaataagttgtgagcctgagaaatcatgc
ctcagatctcctcaagagtcacaaagccgtcaaatcagaagctgcacaaaggttcacatg
caagggattgctgttggtagagctgttgatttgacacggtttgaatgttatgaggacttg
ctgatgaagctggaggatatgtttgacattgaaggtgagctcagtggatcaacaaagaaa
tggcaagttgtctacacggatgatgaagatgacatgatgatggttggggatgacccatgg
catgagttctgcagcatggtgaggaagattttcatatatacatctgaggaagtgaagagg
ttatcacccaagattaaactcccagtcaatgaagagatcaaagcaaccaaagctgatggt
gaccctgatgctgcagttaacatggaggaccaatcatctgttgttgggcctgggtgctaa
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