Manihot esculenta (cassava): 110624860
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Entry
110624860 CDS
T05761
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
mesc
Manihot esculenta (cassava)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
LID
Motif
Other DBs
NCBI-GeneID:
110624860
NCBI-ProteinID:
XP_021625964
LinkDB
All DBs
Position
10:complement(2748540..2757102)
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AA seq
996 aa
AA seq
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MITDTYSKILPDISMRSMLKNEDLGKLIREQRLHQEVASDREELNIYRSGSAPPTVEGSL
SSIGGLFDATGLPAIKKNNKGGFLSEEDIRSDPAYVNYYYSNVNLNPRLPPPLLSKEDWR
FSQRLHGGGVNPVVGDGRKGGRGGDNEGNRSLFAVQPGFGGGKEENGNGAGGGVEWGGDG
LIGLPGLGLGRRQKSIAEIIQDDMDHANSILRHPSRPASRNAFDDTVETSEAQFAQLHDL
ASADALHSVSNKQGVTMVPNVGATASHTYASALGASLSRSTTPDPQLVARAPSPRIPTIG
GGRTNSMDKREVSGPNSFKGVSSSLNESPELVAALSGLNLSSVDVENHARSQSLHNIDDH
CDLFNLHGDQNHVKQQSFLNKSNLSANSYLKGPSTPALNGRRGSPSDLQNADNTNSPFTN
YSLSGYPVNPSSPSMMGSQFGSGVLPPLFENVAAASAMGGAGLDSRALSALGPNLMAAAA
ELQNRAGNQTAGTALQMMPLMDPLYLQYLRSNEYTAAQLGALNDPTVDREYLGNSYVDML
QKAYLGALLSPQKSQYGIPYLGKSGSLNHNYYGNPAFGLGMSYSGSPIGGPLLPNSPIGS
GSPVRHGERNMRFNSGLRNLSGGVIGSWHSETGGNLDENFPPSLLDEFKSNKTKCFELLE
IAGHVVEFSADQYGSRFIQQKLETATADEKNMVFNEIMPQALSLMTDVFGNYVIQKFFEH
GSASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEMVELDQQTKMVTELDGHIMRCVRDQ
NGNHVIQKCIECVPEDAIHFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDTNTQRIMMD
EILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLT
FGTPAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKIHL
NALKKYTYGKHIVARVEKLVAAGERRISFLTLHPAA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgacacgtattcaaagattttgcccgatatatcaatgcgatcaatgctcaaa
aacgaggatttgggcaaactgattagagagcaaaggttacatcaagaggtagcgagtgac
agagaggagctcaatatttatcggagtgggtctgccccacctactgtagaagggtcttta
agctcgattgggggcttgtttgatgctactgggttacctgctatcaaaaagaacaacaaa
ggtgggttcttgagcgaggaggatatacgttctgatccagcttatgttaattattactac
tctaacgtgaacttgaatccaagactgcctcctcctttgttatcaaaggaggattggagg
ttttcacagagattacatggtggtggggttaatccggtggttggggacggacggaagggt
ggtagaggcggtgataatgaaggaaacaggtcgctttttgcagtgcagccagggtttggg
ggagggaaggaggagaatgggaatggggctggtggaggagtcgagtggggaggagatggg
ttgattggattgccaggtttaggcctaggaagaaggcaaaagagcattgcagaaatcatt
caggatgacatggatcatgcaaattccatcttaaggcacccttctcgtccagccagtcgg
aatgcatttgatgatactgtagaaacttctgaagcccagtttgctcagcttcacgattta
gcatctgctgatgctttgcattctgtttcaaacaaacagggggtgaccatggtcccaaat
gttggtgcaactgcctctcatacctatgcttctgctttaggtgcctccttgtcacgaagc
actacacctgaccctcagcttgttgctagagctcctagtcctcgcattccaactattgga
ggaggtaggaccaattctatggataaaagagaagttagtggtccaaactcatttaaaggt
gtctcatcaagcttgaatgagtctcctgagcttgtagcagctttgtctgggttgaatctg
tcttcagttgatgtagaaaatcatgcaagatcacaaagccttcataacattgatgaccac
tgtgatctcttcaatctgcatggcgaccagaaccatgtcaagcaacagtcatttttgaat
aaatctaatttatctgctaactcatatttaaaaggcccctcaacaccagctcttaatggc
agaagaggctctccttctgaccttcagaatgctgataacacaaattccccatttacaaac
tacagcttgagtgggtatcctgtgaatccttcatctccatccatgatgggaagccagttt
ggcagtggggttttaccacctttatttgaaaatgttgctgctgcatctgcaatgggagga
gctggattggattctagagcattgagtgctttagggccaaacttaatggctgctgcagca
gaattacagaatagagctggaaatcagactgctggtactgctctgcagatgatgccacta
atggatcccttgtatcttcagtacctgagatcaaatgaatacactgctgcacagctgggg
gcactcaatgatcctactgtagacagagagtatcttggaaattcatacgtggatatgctc
caaaaagcttacttaggagcattgctttcaccgcaaaaatcacaatatggcattccctat
ctgggcaaatctggcagcttgaatcacaattactatggtaatccagcatttggtcttggc
atgtcttattctggaagtccaataggtgggccacttcttccaaattctcctattggatct
ggcagtcctgtcaggcacggtgagagaaacatgcgttttaattctgggttgaggaatctg
tcggggggtgttataggatcttggcactcagagactggtggtaatttggatgaaaatttt
cctccctctttgctagatgaattcaaaagcaataaaactaaatgttttgaactcttggaa
attgcaggtcatgttgttgaattcagtgccgatcagtatgggagtcgattcattcaacag
aaacttgaaactgctacagcagatgagaaaaacatggttttcaatgagattatgccccaa
gctctttcattaatgactgatgtttttggtaattatgtgatacaaaagttttttgagcat
ggatctgcatcccaaataagagaactggctgaccaattaactgggcatgtcctgacgctt
agccttcaaatgtatggttgtcgagtgatacaaaaggctatagaaatggttgagttggac
cagcagacaaaaatggtgacagagcttgatggtcatattatgcgctgtgtacgtgatcag
aatgggaaccatgtcatccagaagtgtattgaatgtgtccctgaagatgctatacatttt
attgtttcaacgttttatgatcaagttgtgacgctatccactcatccatatggttgtcga
gtcatacagagagtcctggagcactgccatgacacaaatacccagcgtataatgatggat
gagattttgcaatctgtttgcatgttggcacaagaccagtatggaaattatgttgtacag
catgtgctagagcatggaaagcctcatgaacgttcagcaataataaagaaattaactggg
cagatagttcaaatgagccagcagaaatttgcctccaatgttatagagaagtgtctaaca
tttggtactcccgcagaacgccaggctctggtgaatgaaatgcttggtaccactgatgaa
aatgagcctcttcaggttatgatgaaagatcagtttgctaattacgttgtacagaaagtg
ctggaaacttgtgatgaccagcaacttgaactaatccttaatcgaataaagattcactta
aatgctctgaagaagtatacttatgggaagcatatagttgcgcgtgtagagaaacttgtt
gcagctggagagaggaggatcagcttccttaccctgcatcctgctgcgtag
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