KEGG   Manihot esculenta (cassava): 110624892
Entry
110624892         CDS       T05761                                 
Name
(RefSeq) ras-related protein RABF1 isoform X2
  KO
K07887  Ras-related protein Rab-5A
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04144  Endocytosis
mesc04145  Phagosome
mesc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110624892
   04145 Phagosome
    110624892
   04148 Efferocytosis
    110624892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110624892
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    110624892
   04031 GTP-binding proteins [BR:mesc04031]
    110624892
Membrane trafficking [BR:mesc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    110624892
 Endosome - Lysosome transport
    110624892
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110624892
  Exosomal proteins of other body fluids (saliva and urine)
   110624892
  Exosomal proteins of colorectal cancer cells
   110624892
  Exosomal proteins of bladder cancer cells
   110624892
GTP-binding proteins [BR:mesc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    110624892
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 110624892
NCBI-ProteinID: XP_021626007
LinkDB
Position
10:complement(5567445..5574230)
AA seq 201 aa
MGCSSSLPDRSSRRLSGLGNPESNGVPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE
SFNKAQYWVKELQKHGSPDIVLALVGNKADLHENREVPVQDGMDYAEKNGMFFIETSAKT
ADNINQLFEEIGKRLPRTPPS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggttgttcatcttctcttccagataggagttctaggcggttgagtggacttggcaat
cctgagagcaatggagtgcctgatgccaaaaacctacgggtgaagctggtgttgttaggt
gattctggtgttggtaaaagctgtattgttctacgctttgttcgtggacaatttgatcca
acatccaaggtaactattggagcttcatttttgtcacagacaattgctttgcaagattct
acaacagttaagtttgaaatatgggacactgcaggacaagaaagatatgctgcgctggca
ccactatactacagaggtgctgcagttgcagttattgtatatgatataacaagcccagag
tcattcaataaagcacaatattgggtcaaggaactacaaaaacatgggagccctgatata
gtcctggctttagttgggaacaaggctgatcttcacgagaatcgagaagtacctgttcaa
gatggtatggactatgctgagaagaacggaatgttcttcattgagacttctgccaagact
gcagataatataaatcagctgtttgaggaaattggtaagcgacttccacgtacaccacca
tcatga

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