Manihot esculenta (cassava): 110625035
Help
Entry
110625035 CDS
T05761
Name
(RefSeq) transcription elongation factor TFIIS isoform X3
KO
K03145
transcription elongation factor S-II
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110625035
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110625035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
SHPRH_helical-2nd
Baculo_LEF5_C
RGS-like
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
110625035
NCBI-ProteinID:
XP_021626221
LinkDB
All DBs
Position
10:complement(428097..430197)
Genome browser
AA seq
341 aa
AA seq
DB search
MLTERQGERELLELFEAAKKAADAAEEDGVAEESRCLDALVQLKAFPVTIQLLVSTQVGK
HLRPLTKHPRRNIQDLASDVFALWKKVVLEQTHGDKNSVKAKPGNAENVKPEKLQKTTPV
KVEKFSKNAMVKVEKINQNGAPRSAKVVKSETAMTSHNPSAPVGCIPKCNDALRDRIREQ
IYEALYKVSGEAEEDSWGDVNACDPIQVAVSVESVLFKHWGRSNGSHKVKYRSLMFNIKD
AKNPDFRRKILLGQVKAEEIVHLSSEEMASDEMQQKNQQIKEKALFHCELGGAPKATTDQ
FKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCNNHWKFC
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggagagacaaggagagagagagttgctggagctattcgaagctgcaaagaaa
gcggctgatgcggcggaagaagacggagtagccgaggaaagtcgatgccttgatgccttg
gttcagctcaaggccttccctgttaccattcagcttctcgtctctacacaggtggggaag
catcttcgacctctaaccaaacatcctaggaggaacatccaggatcttgcttctgatgta
tttgcattgtggaaaaaagtggttctcgagcaaacacatggtgataaaaattctgtcaaa
gctaagccaggaaatgcggagaatgttaagcctgagaagcttcaaaagactacccctgta
aaggttgagaaattctccaagaatgcaatggtcaaggttgagaaaattaatcagaatggc
gcaccaagatctgccaaagttgtgaagtctgaaactgccatgacaagccacaatccatca
gccccagtgggatgtattccaaagtgtaatgatgccttgagggacaggatccgtgaacaa
atttatgaggcattgtataaggtctctggcgaagctgaggaagatagttggggtgatgta
aatgcctgtgacccaattcaagttgctgtttcagtcgaatcagtgttgtttaaacattgg
gggcgttctaatggctcccataaggtcaagtatagatccttgatgtttaacattaaggat
gcaaaaaatcctgatttcaggagaaaaattcttcttggacaagtgaaggcggaggaaatt
gtacacttgagttcagaggaaatggcaagtgatgaaatgcaacagaagaatcagcagatc
aaagagaaagccttgttccactgtgagcttggaggtgccccaaaagccacaactgatcag
ttcaagtgtggtcgatgtgggcaacgcaagaccacttactatcaaatgcagactaggagt
gctgatgagcctatgacaacatatgtgacatgcgtaaactgcaataaccattggaagttc
tgctaa
DBGET
integrated database retrieval system
