Manihot esculenta (cassava): 110625243
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Entry
110625243 CDS
T05761
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110625243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110625243
Membrane trafficking [BR:
mesc04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
110625243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
110625243
NCBI-ProteinID:
XP_021626561
LinkDB
All DBs
Position
1:6393906..6402679
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AA seq
1469 aa
AA seq
DB search
MGRIKQQSGIKAIEEEPEDCDSSYSNKATLACMINAEVGAVLAVMRRNVRWGGRCMSGDD
QLEHSLIQSLKALRKQIFSWQHPWHTINPSVYLQPFLDVIRSDETGAPITGVALSSVYKI
LTLDVIDQNTVNVEDAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKGKASVTL
SNQHVCTIVNTCFRIVHQVGTKGELLQRIARHTMHELVRCIFSHLPDIENTEHALVNGVS
PAKQEIAGLDNDYTFGSKQIENGSSELEGQTSSVSYVLSASTGLVATVMEESTIGGSSGK
GALPYDLQLMTEPYGVACMVEIFHFLCSLLNVVEHMGMGPRSNTVAVDEDLPLFALGLIN
SAIELGGPSFHRHPRLLSLIQDELFRNLMQFGLSISPLILSMVCSIVLNLYHHLRTELKL
QLEAFFSCVILRLAQSKYGALYQQQEVAMEALVDFCRQKTFMVEMYANLDCDITCSNVFE
DLANLLSKSAFPVNCPLSTMHVLALDGLIAIIQGMAERLGNGSFNSDEPPVNLEEYTPFW
MVKCDNYSDPDHWVTFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSV
ACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQGMNLDTALRLFLETFRLPGE
SQKIQRVLEAFSERYYEQSPQILANKDAALLLSYSLIMLNTDQHNVQVKKKMTEEDFIRN
NRHINGGNDLPREFLSELYHSICKNEICTTPEQGTGFPEMIPSRWIDLMLKSKKTAPFIV
SDSKAYLDHDMFAIMSGPTIAAISVVFDHAETVDVYQTCIDGFLAVAKISACHQLEDVFD
DLVVSLCKFTTLLNPSSAEEPVLAFGDDPKARMATVTVFTIANRYGDYIRAGWRNILDCI
LRLHKLGLLPARVASDAADESEVSSDPGHGKPITNSLSSAHTQSFGIPRRSSGLMGRFSQ
LLSLDTEEPRSQPTEQQLAAHQHMLQTIQKCHVDSIFTESKFLQAESLLQLARALIWAAG
HPQKGNNTPEDEDTAVFCLELLIAITLNNRDRIALLWQGVYEHIANIVQSTVMPCALAEK
AVFGLLRICQRLLPYKENLADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKVNATHI
RSLMGWRTITSLLSITARHPEASEAGFDALLFIMSDGAHLVAANYVLCIEAARQFAESRV
AQAERSMRSLDLMAGSIDFLTRWSHEAKEAMEEEEAAKLLQDIGEMWLRLVQGLRKVCLD
HREDVRNHALLSLQKCLRGVDGINLPHGFWLRCFDLVIFTMLDDLLEIAQGHSQKDYRNM
DGSLIIAVKVLSKVFLQLLPDLAQLTTFCKLWLGVLSRMEKYLKVKVRGKKCEKLQEVVP
ELLKNTLLVMKAKGVLVQRSALGGDSLWELTWLHVNNIAPSLQSEVFPDRDWERTQHEHG
ETGESLVATESGSLTLNGPVASEDFGAGG
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcataaagcagcaatcaggaattaaggcaattgaggaagaacctgaagactgt
gactcttcctattctaacaaggctactctagcatgcatgattaatgcagaagtaggtgca
gtattggcagtcatgagaagaaatgtaagatggggtggtcgttgtatgtcaggtgatgat
cagctagagcactctttgattcagtctttgaaggcactgaggaaacagatcttctcttgg
cagcatccttggcataccatcaatccttctgtgtatctccaaccatttttggatgttatt
cgatcagatgaaactggtgctccaatcactggggttgctttgtcatctgtttacaagatt
ttaactcttgatgtgattgatcaaaacactgtaaatgttgaagatgctatgcacttggta
gttgatgcagtgacaagttgccgatttgaggtgactgatccagcatcagaagaggtggtt
ctaatgaagatacttcaggttcttctagcttgtatgaaaggcaaagcatcagtcacactt
agtaatcagcatgtctgtaccatagtgaacacttgtttccgtatagttcatcaagtagga
actaaaggcgagttgttacagcgaatagctcgacacacaatgcatgaactcgttaggtgc
attttttctcaccttccagatattgaaaacacagagcatgcgctggttaatggagttagt
cctgccaaacaggagattgctggtctagataatgattacacatttgggagcaaacaaata
gagaatggcagttctgagttggaagggcaaacatcctctgttagctatgttttgagtgct
tctacgggactggtggcaactgtaatggaagaaagtacaattggtggtagtagtggaaaa
ggtgctcttccatatgatttgcagctcatgacagagccatatggtgtcgcttgcatggtg
gagatatttcacttcttgtgttctttattaaatgttgttgaacatatgggaatgggtccc
agatctaatacggtagctgttgatgaagatctacccctttttgctttgggattaattaat
tcagcaatagaattgggtgggccttcttttcatcgtcaccccaggttgctgagtttgatt
caggatgaactatttcgtaatttaatgcaatttggcttgtcaatcagcccacttattctc
tcaatggtttgtagtattgttctaaacctgtatcaccatctgcgtactgaactcaaattg
cagctcgaggcttttttctcttgtgtcattctgagacttgcccagagtaaatatggtgct
ttataccaacagcaagaggttgcaatggaggctcttgtagacttctgcaggcagaaaaca
tttatggtcgagatgtatgctaatttggattgtgacataacatgcagtaatgtgtttgaa
gacctagctaatttgttgtcaaagagtgcttttcctgtgaactgcccattgtctacaatg
cacgttcttgctttggatggtctcattgccattattcaggggatggctgaaaggttaggc
aatggatcatttaattcagatgagcctccagtgaaccttgaggagtatacacccttctgg
atggtgaagtgtgacaactatagtgatcctgatcattgggttacctttgtccgccggaga
aagtacattaagagaagattgatgattggagctgatcactttaaccgtgatccaaaaaaa
ggcctagaatttctccaaggaacacatctcttacctgacaaacttgatcctcaaagcgtg
gcctgctttttcaggtatactgctgggttagataagaatcttgtgggggatttccttgga
aatcatgatgagttctgtgtccaggttcttcatgaatttgctgggacatttgatttccaa
ggcatgaatttggacactgctctgcggttgttcttggaaacttttaggttgcctggtgaa
tctcaaaaaatacaaagggtgcttgaggcattttctgaaagatactatgagcaatcacca
cagatcctggctaacaaggatgctgctcttttgttatcttattctctcataatgctcaac
acagatcagcataatgtgcaggttaagaaaaagatgacagaagaggattttatacggaat
aatagacatatcaatggaggcaatgacttacctcgagaattcctgtctgaattgtaccac
tccatttgcaagaatgagatatgcacaactccagaacaaggaactggtttccctgaaatg
atcccaagtcgttggattgatctaatgctcaaatccaagaaaactgcaccatttattgta
tctgattcaaaagcctaccttgaccatgatatgtttgctataatgtctggtcccacaatt
gctgctatctctgttgtttttgatcatgcagaaactgtggatgtttaccaaacatgcatt
gatggattcttagctgttgcaaagatatcagcctgtcatcaacttgaagatgtatttgat
gatttggttgtctctttatgtaagttcacaactctattgaatccatcatctgctgaagaa
cctgtgttagcctttggtgatgacccaaaagccaggatggcaactgtgaccgtctttacc
attgcgaataggtatggtgattatattcgcgcaggttggagaaatattctggattgcatt
ctacggttgcataaacttgggcttctacctgcacgtgtagccagtgatgctgctgatgaa
tctgaggtttcttctgaccctgggcatgggaaacctatcacaaattctttgtcttcagct
catacgcaatcctttggaattccaagaagatcttctggattgatgggtaggtttagtcag
ctcttatcccttgatactgaggagccaagatcacaacccactgaacaacaacttgctgct
catcaacatatgcttcagactatccagaagtgccatgttgacagcatatttactgagagt
aagttcttacaagctgaatctttgttacagcttgctcgagcactcatctgggcagcaggg
catccccagaaggggaacaacactccagaggatgaagatactgcagttttctgcctggag
ttgctgattgcaattactctgaacaatcgggacaggatagcattattatggcagggtgtt
tacgagcacatagccaatattgttcaatcaactgtaatgccttgtgccttagcagagaag
gctgtgtttggactcctccgaatttgccagcggctgctgccttacaaagagaacctcgct
gatgaacttttgaggtcattgcaacttgttttgaaacttgacgcccgtgttgctgatgct
tattgtgaacaaattacgcaggaagtcagtcgccttgtgaaagtgaatgctacccacatc
agatctctaatggggtggcgtacaattacatcactactttccatcacagctcggcaccct
gaagcttctgaagctggatttgatgcattgttgttcattatgagtgatggagctcacttg
gtagctgccaattacgtcctctgcattgaggcagccaggcaatttgcagagtctcgcgta
gcacaggcagaaagatctatgcgttcactagatctaatggcaggttccattgacttttta
acgcggtggtctcatgaggctaaggaagcaatggaagaggaggaagctgcaaagctgttg
caggatattggggagatgtggctgaggcttgtgcagggattaagaaaagtttgtttggat
catcgagaagatgttagaaaccatgcacttttatcattgcaaaagtgcttgagaggagtg
gatgggatcaatctgccacatggtttttggttacggtgttttgatctggtaatttttaca
atgcttgatgacttgcttgaaattgctcagggacactcccaaaaggattacagaaatatg
gatggctctctaattattgctgtaaaggtcctttcaaaagtgtttttacagttactccca
gacctagcacagttgactactttctgtaaattatggctgggggtgctcagccgaatggaa
aaatatctgaaagtcaaagtaagagggaagaagtgtgagaagcttcaggaagtagtgcct
gagcttcttaagaacaccttgctagtaatgaaggccaagggagtactggtacagaggagt
gccttaggtggggacagtttgtgggagcttacatggctacatgtcaataacattgctcca
tctttacaatctgaggtgttccctgatcgagattgggagcgcacacagcatgagcatggt
gaaacaggtgaaagtctggtggccactgaatcaggttctcttactttaaatggaccagtg
gcttctgaagattttggcgctggaggttaa
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