Manihot esculenta (cassava): 110625288
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Entry
110625288 CDS
T05761
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110625288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110625288
Membrane trafficking [BR:
mesc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110625288
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_2nd
Beta-prop_Vps41
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110625288
NCBI-ProteinID:
XP_043817264
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Position
10:complement(6441666..6446443)
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AA seq
391 aa
AA seq
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MESGRGVISCGSWIRRPNNVNLVVLGKSRTRDSSSSSSSVLEFFSFDPDTTSLSPAPLAT
YVLEKTEGDPVTTAVHPSGDYIVCSTTKGGCKLFELHNEETNLKVLSKQLPPLQDVGPQK
CLAFSVDGSRFVTGGMDGHLRILEWPSHRVILDEPKAHKFFRDMDVSLDSAFLVSTSSDG
SARIWNMQDGGPVTNLSRNSDEKIELCRFSKDGTKPFLFCTVQRGDKAVTAVYDISTWKK
IGYKRLLKKPACVMSVSLDGKYLALGSKDGDICVAEVKKMEIRHYSKRLHLGTCITSLEF
CPNQRVVLSTSDEWGAVVTKLTVPADWKEWQIYLLLVGLFLASAVAFYVFFQNSDSFWNF
PLGKDQPARPKFDSILGDAQSSDDVFGPLDM
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgggccgtggggtaatttcatgcggatcgtggattcggagacccaataacgtt
aatctggtcgtcttgggtaagtcaaggactcgcgattcttcttcgtcttcgtcttctgtg
ctcgagttcttctccttcgatcccgatactacgtctctctcccccgctcccttggctaca
tatgtgctcgaaaaaactgaaggtgatccagtaacaactgcggttcatcctagtggagat
tatattgtgtgttctacaacaaaaggtggctgcaaattgtttgagttgcacaatgaagaa
acaaatttaaaggtgttgtccaaacaattacctcctttacaagatgttggtccacaaaaa
tgcctagcctttagtgttgatggatccagatttgttactggtggcatggacgggcatctc
agaattttggagtggcctagccatcgtgtaattttagatgaaccaaaagcgcacaaattc
ttcagagatatggatgttagcttagattcagcatttttagtttcaacatcttctgatggt
tctgcgagaatatggaatatgcaagatggtgggcctgtaactaatttgtcccgcaactcg
gatgagaagattgaattatgtcgattctctaaagatgggacaaaaccatttttattctgc
actgttcagagaggtgataaagctgttactgctgtttatgacataagtacatggaagaaa
ataggatataagaggctgcttaagaaacctgcttgtgtaatgtctgtcagcctggatggg
aaatatcttgctctaggaagcaaggatggggacatttgtgtagctgaagtaaagaaaatg
gagattaggcactatagcaagaggctgcacctgggtacatgcattacatccctggagttc
tgtcccaatcagagggttgtgttaagtacttccgatgaatggggggctgtggtgactaag
ctgactgttcctgcagattggaaagagtggcagatctatttgttgcttgtggggctattt
ttggcatctgcggttgcattttacgttttctttcagaattctgattcattttggaacttc
cctcttgggaaagatcaacctgcaagaccaaagtttgattccattttaggagatgcacag
tcttctgatgatgtatttgggcctttagatatgtga
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