Manihot esculenta (cassava): 110625307
Help
Entry
110625307 CDS
T05761
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mesc01003
]
110625307
Enzymes [BR:
mesc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
110625307
Glycosyltransferases [BR:
mesc01003
]
Polysaccharide
Structural polysaccharide
110625307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
110625307
NCBI-ProteinID:
XP_021626616
LinkDB
All DBs
Position
1:6480243..6484811
Genome browser
AA seq
506 aa
AA seq
DB search
MEVRSEGLQVRCEKVASGTPPVIARTRVQVWFIRVCSSILLWTALVQLVTVGELWQPHFF
TNITNKITQITPFPIAAQVHAQPPPPPLLQARNYTSNGYLKVSCNGGLNQMRAAICDMVA
VARLLNLTLVVPELDKTSFWADPSNFEDIFNVKHFIDSLRDEVRIVRRVPKRFNRKSGYK
VLEMPPVSWSDEKYYLEQILPLFVKSKVLHFNKTDTRFANNRISLNLQKLRCRVNFQALK
FTPQIETLGNKLVRILQERGPFVALHLRYEMDMLAFSGCTHACTKDEAEELKTLRYAYPW
WREKEIVSEERRLQGLCPLTPEETALVLQALGFDNETQIYIAAGEIYGSERRLAALRAAF
PHIVRKEMLLDPVELQQFQNHSSQMAALDFMVSIASNTFIPTYDGNMAKVVEGHRRYLGF
KKTILLDRKRLVELLDLHQNGTLPWNEFAFAVQAAHEKRMGQPIRRRVIADKPKEEDYFY
ANPQECLCERTNCDDLLGPNNSSSIQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaggttagatctgagggtttacaagtgaggtgcgagaaggttgcgtcggggactcct
ccagtgatcgctagaactcgcgtacaggtttggtttataagggtttgctccagtattctg
ctatggactgctttggttcagctcgtcaccgttggggagctatggcaaccgcactttttc
accaatattaccaataaaatcacccagatcacgccgttccctattgcagctcaagtccat
gctcaaccgccgcctccaccacttcttcaagcaagaaattatacaagtaatggttatctt
aaggtgtcctgcaatgggggcttgaatcaaatgcgtgctgcgatctgtgacatggtggct
gttgctcgtcttttgaatctcactttggttgttcctgaacttgacaagacgtctttctgg
gctgaccctagtaactttgaagacatatttaatgtgaaacatttcattgactcgctaaga
gatgaagttcgaatcgtcagaagggtgccaaaaagatttaataggaaatctggatacaaa
gtattggagatgcccccagttagttggtcagatgaaaaatattacctagaacagattcta
ccactttttgtcaagtcaaaggtgttgcacttcaacaaaactgatactcgcttcgcaaac
aataggatctcactcaatcttcagaaactcagatgccgtgttaattttcaggcactgaag
ttcactccacagattgaaactttggggaacaaattggttcgcattcttcaggagagggga
ccttttgtggccttgcatcttaggtatgagatggacatgttggctttctctggttgtact
catgcctgcaccaaggatgaagctgaggagctcaagacattaaggtatgcgtacccttgg
tggagggagaaggagatagtttctgaagagaggagactacaaggtttgtgtcctttgaca
cctgaagagacggcattagttttgcaagcattgggttttgacaacgaaactcagatatat
attgcagcgggggagatatatggcagtgaacggagacttgcagcattaagggctgcattt
ccacatattgtcagaaaggaaatgctgttagatccagtggagctgcaacaattccagaat
cattcttctcagatggctgctctggatttcatggtatcaatagccagtaacactttcata
cccacttatgatggaaacatggcaaaggttgtggaaggtcaccgccggtatcttgggttt
aaaaagacgattctgctggatcgaaaaagacttgttgaattattggatttgcatcaaaat
gggacacttccatggaatgagtttgcatttgctgttcaagcagcacatgagaaaaggatg
ggacagccaatccgccgcagggttatagcagataaaccaaaggaggaagattatttttat
gcaaatcctcaagagtgcctttgtgagagaacaaattgtgatgacttgctaggtcctaat
aactcaagttcaatacagtga
DBGET
integrated database retrieval system
