Manihot esculenta (cassava): 110625481
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Entry
110625481 CDS
T05761
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110625481
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110625481
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
110625481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_29
AAA_16
AAA
AAA_28
Zip
RsgA_GTPase
AAA_25
Zeta_toxin
nSTAND_NTPase5
nSTAND3
EBV-NA3
Motif
Other DBs
NCBI-GeneID:
110625481
NCBI-ProteinID:
XP_021626777
LinkDB
All DBs
Position
11:complement(6042276..6049743)
Genome browser
AA seq
1441 aa
AA seq
DB search
MESVDLYRARSSFRRSSPLTRRNSGLEIFAPSFREEDDEESLKWAALEKLPTYERLRKGI
LTTMTGGVSEIDVHNIGSQERKNFLERLVKVADKDNEKFLLKLKNRIDRVGIDIPTIEVR
FEHLTVEAEAYEGSRALPTFFNYYINMLEGLLNNFHILSSRKKRLHILKDVSGIIKPSRM
TLLLGPPSSGKTTILLALAGKLDPTLKVSGRVTYNGHHLHEFIPQRTAAYISQHDLHIGE
MTVRETLAFSARCQGVGSRYDLLAELSRREIAENIKPDSDIDVFMKAAATEGQEVNVMTD
YILKVLGLEVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPSLALFMDEISTGLDSSTTY
QIVESLRQYVQILKGTALISLLQPAPETYDLFDDIILLSDGLIVYQGPREQVLQFFEFMG
FQCPERKGVADFLQEVTSRKDQMQYWARKDEPYRFITAKEFSEAYKSFHVGRGLREELAT
PFEKANSHPAALTTKKYGVNKKELFKACCSREFLLMKRNSFFYVFKLCQLTITTLIAMAL
FFRTEMHRDSVTDGGIYVGALFFIVLVVLFNGMAEISMTIAKLPVFYKQRDLCFYPAWAY
ALPTWILKIPITFIEIGISVFMTYYVIGFDPNVGRLFRHYLVLLLVNQMASGLFRSIAAV
GRNMIVANTFGSFVLLLLFVSGGVVLSRDNIKKWWMWSYWTSPMMYGQNAIVVNEFLGHS
WSHVLPKSIEPLGIQVLKSRGFFTEAYWYWLGAGALCGFTIVFNLLYTVALTFLSEYSKP
QAVTSKEPQDNGTGRMEDGVRLGYHGNSSNQQTSTVSRDEIIREKSSRSSQNNRKGMVLP
FEPHSITFDEIVYSVDMPQAMKNEGVHEDKLVLLNSVSGSFRPSVLTALMGVSGAGKTTL
MDVLAGRKTGGYIEGSITISGYPKKQETFARISGYCEQNDIHSPHITVYESLLFSAWLRL
PCEVETREMFIKEVMELVELNTLGQALVGLPGVNGLSTEQRKRLTIAVELVANPSVIFMD
EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP
LGRHSCHLINYFEGIEGVEKIKDGYNPATWMLEVTSTTQEMALGVDFADIYRNSELYRRN
KALIKDLSKSAPGSKDLYFPNQYSLSFFGQYLACLWKQHLSYWRNPPYTAIRFLFTAFIG
LIFGTMFWDLGSKMKKQQDLFNAVGSMYAAVLFLGFIYASAVQPVVSVERTVFYRERAAG
MYSALPYAFGQIVVELPYVFMQAAVYGVTVYAMIGFEWNASKFFWYLYFTYFSLLYFTFY
GMMAVGVSPNHQISSIISFAFFIIWNLFSGFIIPRTMMPAWCSWYYWLNPVSWTLYGLIT
SQFGDIKETLETGETVEHFTRHYFGFRHDFLGLVAAMVFVFVILFALSFAVSLKVFNFQK
R
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgttgatctttatagagcgagaagcagcttcagaagaagtagtcctttgact
cggagaaacagtggtttggaaatttttgcgccatcttttcgagaagaagatgatgaagag
tctttaaaatgggctgcgctagagaaattgcctacctacgaacgtttgaggaaaggtata
ttaactacgatgactggcggagtcagtgaaattgatgtacacaatattggctcgcaagaa
aggaagaatttccttgagcgattggtgaaagtggcggataaggataatgagaagttctta
ttgaagcttaagaatcgtatcgatcgagttggaattgatatccccacaattgaagttcgg
tttgagcatctaacagttgaagcagaagcctatgaaggaagcagagctttgcctacattc
ttcaactactatattaatatgctagagggtcttttgaataatttccatattctttcaagc
agaaagaaacgcctgcatatcctcaaagatgtgagtggtatcatcaagccatcaagaatg
acattacttttgggtcctccaagttctggaaagaccacgattttgttggctttggctgga
aagcttgatcccactctgaaggtctcaggaagggtcacttacaatggtcatcacttgcat
gagtttataccccaaagaactgctgcctatattagtcaacatgatcttcacataggagaa
atgactgtaagagagactttggccttttctgctagatgccaaggcgttggaagccgttac
gatctattagcagagttatcacgaagagagattgcagaaaatattaaacctgattctgat
attgatgtcttcatgaaggcagctgcaacagaaggtcaggaggtcaatgtcatgacagat
tatattctaaaggttttaggactggaagtctgtgcagatacaatggtaggggatgaaatg
ttgaggggaatttctggaggacaaagaaaacgtgttacaactggtgagatgctggttgga
ccatcattagctttgtttatggatgagatatctactggtttggacagctcaacaacttat
cagattgtggaatcacttaggcaatatgttcaaattctgaagggaactgctttaatttct
ctcctccagccggcaccagagacatatgatctctttgatgatatcattctcctttctgat
ggcttgatagtgtaccagggtcctcgcgagcaggtgcttcaattttttgaattcatgggc
ttccagtgtcctgaaagaaaaggcgtggctgacttcttgcaagaagtgacatcaaggaaa
gatcagatgcagtattgggctcgtaaagatgagccttacagatttatcactgccaaggaa
ttttctgaggcatacaagtcattccatgtaggacgaggacttagagaggagcttgcaact
ccatttgaaaaagccaacagccacccagctgctttgacaaccaaaaagtatggtgttaac
aagaaggaactattcaaagcttgctgctccagagaattcctgcttatgaagagaaactca
tttttttatgtcttcaagttatgtcaactgacaataacgacattaattgcaatggcactc
ttttttcggactgagatgcaccgagattcagtaactgatggaggaatttacgtgggtgct
ttgttctttattgtgcttgttgtattgttcaatggcatggcagagatttcaatgaccatt
gcaaagctgcctgttttctacaagcaaagagacctctgtttctatcctgcatgggcttat
gctcttcccacatggatccttaaaatccccatcacattcatagaaattgggatttcagta
ttcatgacatattatgttataggatttgatccaaatgttggaaggttgttcaggcattac
ctcgtcctcctacttgttaaccagatggcttctgggttattccgatctatagctgcagtg
ggtaggaatatgattgtagctaacacctttggttcattcgtactgctgctgctttttgtt
tcgggtggagttgtcttgtcacgagataacataaagaaatggtggatgtggagctactgg
acatccccaatgatgtatggacaaaatgctattgtagttaatgaattcctgggacatagt
tggagtcatgttcttccaaaatcaatagaaccattaggaattcaagttttaaaatctcgt
gggttcttcacagaagcatattggtactggctaggagcaggagcactttgcggattcaca
atagtattcaacttgttatacactgtagctcttacttttcttagtgaatatagcaagcct
caggctgttacatcaaaagaacctcaagacaatggaactggtagaatggaagatggtgtt
cgtttgggttaccatgggaatagctctaatcaacaaacaagcacagtcagtagagatgaa
attataagagagaagtcatccaggtcttcacagaacaacagaaaaggaatggttcttcca
tttgaaccacattccattacatttgatgaaattgtatactctgttgacatgccacaggcg
atgaaaaatgagggtgttcatgaagacaaactggtacttctgaatagtgtgagtggttct
tttaggcctagtgttctcactgctctaatgggtgttagtggtgctggtaaaacaactctg
atggatgtgctagctggtaggaaaactggaggatacattgaggggagtatcacaatttct
gggtacccaaagaagcaagaaacatttgctagaatttctggatattgtgagcaaaatgat
attcactcgcctcatattactgtttatgagtcccttctcttctctgcttggctacgacta
ccctgtgaagtagaaaccagagagatgttcattaaggaagtcatggagcttgtggaactg
aacacgttggggcaggcattagttggattgcctggtgtaaatggtctgtcaactgagcaa
cgcaagcgtctaaccattgcggttgagctagtggcaaacccctccgtcatttttatggat
gagccaacttcagggctagatgcaagagctgcagcaatagttatgagaacagttagaaac
actgtggatactggaagaacagtagtctgcactatccatcagccaagcattgacatcttt
gaagcttttgatgaactattcctaatgaagcgaggaggacaagagatatatgtggggcca
ttgggtcgacattcttgccatctaatcaattactttgagggaattgaaggagtcgaaaaa
atcaaagatggttacaatccagcaacatggatgttggaagttacctcaacaacgcaagaa
atggctttaggagttgattttgctgatatctacagaaattcagagttgtacaggagaaac
aaagcacttattaaggatttaagcaagtctgctcctggttcaaaggacctctatttccct
aatcaatattcactctcattttttggtcaatatttggcatgcttatggaaacaacatctg
tcatattggcgtaatccaccatatactgctatcagatttctctttacagccttcataggt
ttgatcttcggaacaatgttctgggatcttggttccaaaatgaaaaagcaacaggatctt
tttaatgcagtaggttcaatgtatgctgcagttctattccttggttttatatatgcatca
gctgtgcagccggtggtatctgttgaacgaacggtgttctatagagaaagagctgctgga
atgtactcagccttgccatatgcctttggacagattgtggttgagcttccatatgttttt
atgcaagctgcagtatatggtgttacagtctatgcaatgattggatttgaatggaatgcc
tctaagttcttttggtatttatatttcacgtacttctcattgttatacttcaccttctat
ggaatgatggctgtgggtgtatcaccaaaccaccaaatctcttctataatttcttttgca
tttttcataatatggaacctgttttccggattcataatcccaagaacaatgatgcccgca
tggtgttcatggtactattggttaaatccagtatcttggaccttatatggattgattaca
tcacagtttggagatataaaggagacacttgaaactggtgaaacggtggaacatttcacc
agacattatttcggttttagacatgattttctgggattagttgcagctatggtttttgta
tttgtcatactttttgcactttcttttgcagtttctcttaaggtgtttaatttccagaaa
cgatga
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integrated database retrieval system
