Manihot esculenta (cassava): 110625492
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Entry
110625492 CDS
T05761
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110625492
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110625492
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110625492
NCBI-ProteinID:
XP_043818113
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Position
11:complement(6702566..6704899)
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AA seq
312 aa
AA seq
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MFIVVSSKNYNVLSYGAVGNGNNDDTQAFIKAWTDTCKDSDRPVMLIPKGKTFLVHPVTF
AGPCKSSQVDVQLSGNVIAPNDPNAWKGLDFGKWLTFQYVDGLTVSGDGLLDGRGKGWWD
ISCKYNPGKGCNKLAPSILRFENCNNVKTTRIRTVQSGGVHLVYFGCQGVEVTSVNINAP
DESPNTDGIRLSHSTSVSITDSIIGTGDDCIAMLDRSYNISITRVNCGPGHGISIGSLGG
NGDEVDLENITISHINFYNTTNGARIKTWPAGKGQVRNVEFSNIKFKEVENPIIIDQHYG
ESKNSPRQKTEF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcgtcgtttcgagtaaaaattacaatgttctaagttatggggcagttggcaat
ggcaataatgatgacacacaggcatttatcaaggcatggacagacacatgtaaggattca
gacagacctgttatgttaattcccaagggaaagacattcttggtgcatcctgtaacattt
gcaggtccttgcaaatctagccaagtcgacgttcagttatcaggaaatgttatagcccct
aatgatcctaatgcctggaagggcttagattttggaaaatggttaacttttcaatatgta
gatgggctcacagtatctggcgatggcttgctagatggacgtggaaagggctggtgggat
atttcttgcaaatacaatcctggaaagggttgcaacaaacttgctccatcgatactcaga
tttgaaaactgtaacaatgttaaaacgacaagaattagaactgtacaaagtggcggagtt
catcttgtctactttggctgccaaggtgtggaagtaacatcagtgaacataaacgcacct
gacgaaagccccaacacagatggcatccgcctttcacactcgacttctgtgtccatcact
gactcgattatcggcaccggagatgattgcattgccatgctggatcgctcatacaacatt
tccatcactcgtgttaactgtggacctggtcatggaataagcattggaagcttaggaggt
aatggagacgaggtagacttggagaacataactataagtcatataaatttctacaacaca
accaatggggcaaggatcaagacttggccggctgggaaaggccaagttcgaaacgttgag
ttctctaatataaagtttaaggaagtggagaatcccatcatcattgatcagcactacggt
gaatccaaaaattcaccccgacaaaagacggagttttaa
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