Manihot esculenta (cassava): 110625503
Help
Entry
110625503 CDS
T05761
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110625503
03036 Chromosome and associated proteins [BR:
mesc03036
]
110625503
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110625503
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110625503
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110625503
microRNA pathway
RISC loading complex
110625503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
110625503
NCBI-ProteinID:
XP_021626811
LinkDB
All DBs
Position
11:complement(32169736..32176023)
Genome browser
AA seq
988 aa
AA seq
DB search
MSRRGGGRRQDFRRHQQSSSQFPSFQRGGGGRGGRDGGGRASRGFNPAATVTQSAPTISR
SSSSAFPPPTTSVAQRTTAPQSVASSSRASSSQATVMSSAAVEELRREVEQKLTTGDKVT
KAETLPASSKAVRFTPRPGFGTAGEKCVVKANHFLVEIADRDLCHYDVTVTPEVTSKKLN
RVIISQLVRMYRESHLGNRLPAYDGRKSLYTAGPLPFESKEFVVKLVEENNGAVSSASTR
RERQFKVAIKFASKANIHHLRQFLSGRQLDAPQETIQVLDIVLRESPSEKYTTVGRSFFS
TNLGPRGELGDGIEYWRGYYQSLRPAQMGLSFNIDVSARSFFEPIMVTDFLAKYFRLRDM
SSPLLEQDRIKVKRALRGVKVELSHWDYAKSCKIIDLSNQPLNQIFFTFGDKSVSVVQYF
RDRYNIGLKYTTLPAIQAGSDSKPIFLPMEVCRIVEGQRYSMKLNDRQVTELLKATCQRP
CAREDSIKQIVMRNDYSSDKLVRNEFGIQVKEELTFIDARVLPPPMLKYHDTGGEPRIEP
LLGQWNMKNKKMVNGGRVEFWTCVNFSLKVNQNLPVEFCRQLIEMCVSKGMGFNPNPVLP
IHSAHPNQIERALADVHEQCTAKLSNEKNQLQLLIIILPDVMGSYGKIKRICETELGIVS
QCCQPSQAAKLRRPYFENVSLKINVKVGGRNTVLNDAIQRSIPLVTDIPTIIFGADVTHP
PPGEDTNPSIAAVVASMDWPEVTKYRGNVSAQAHREEIIQDLYKSYHDPVRGLIHSGMIR
ELCIAFRRATGHKPNRMIFYRDGVSEGQFSQVLLHEMDAIRKACCSLEEGYLPRVTFIVV
QKRHHTRLFPVQGGETDHSGNIRPGTVIDTKICHQNEFDFYLNSHAGIQGTSRPAHYHVL
YDENCFTADKLQVLTNNMCYTYARCTRSVSVVPPAYYAHLAAFRARYYIEGETLDGGPSG
GRSTTGRSREVQPLPVIKDNVKDVMFYC
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtggtggtggtcgccggcaggattttcgccgacaccagcaatcatcctct
caatttccgtcgttccagcgtggtggtggcggtagaggtggaagagatggcggtggacga
gctagccgcggtttcaatccggcagcaactgtcactcaatctgctcctacaatatctcgt
tcttcctcgtcggccttccctcctcctaccacgtctgttgctcagcgtacgactgctcct
caatctgtggcttcttcgtcaagagcatcgtcgtctcaggcgacagtaatgagttcggcg
gcagtggaggagctgagacgagaggtggagcagaagcttacaactggagataaggtgacc
aaggctgagacgctgccggcgtcgtcaaaggccgttcgtttcactcctaggcctggcttt
ggtactgccggcgagaagtgtgtggttaaggccaaccattttttggtcgaaatagctgat
agagatctctgtcattatgacgtaactgtgactcccgaagtaacctcaaagaaattaaac
agggttataatatctcagcttgttagaatgtatcgtgagtcacatttgggcaaccgactg
ccagcttatgatggcaggaaaagcctctatacggcaggaccattgccttttgaatctaag
gaatttgtcgttaagctggttgaggagaataatggtgccgtgtcttctgcttcgacaagg
agggaacggcaatttaaagtggctatcaaatttgcttctaaggcaaacattcatcacctg
cgacaatttttaagtggtagacaattggatgccccacaagaaaccatacaagttcttgat
attgttcttagggaatcaccatctgaaaagtatacaactgtcgggaggtcattcttctca
actaatttggggccaaggggtgagcttggtgatggtatagaatattggagaggatactat
caaagccttcgcccagcccagatgggactgtcttttaatattgatgtgtcagccagatcc
ttctttgagccaattatggtgactgactttctagctaaatactttaggttgagagacatg
tcaagtcctctgttggaacaagatcgtattaaggtgaaaagggccttaagaggagtaaaa
gtagagctaagtcattgggattatgctaaaagctgcaagatcattgatttatccaatcag
cccctgaatcaaatattcttcacttttggagataagagtgtgtcagtggttcagtatttc
cgtgatcgatacaatattggtcttaaatatacaacattgcctgctattcaagctgggagt
gattcaaagccaattttcttgcctatggaggtttgtagaattgttgaaggacagagatac
tcaatgaaattgaatgataggcaagtaactgaattgttaaaagcaacatgtcaacgccct
tgtgctcgggaagatagcattaagcagattgttatgcggaatgattacagcagtgataag
cttgtgaggaatgaatttggaattcaagttaaggaagagcttactttcattgatgctcga
gttttacctcctccgatgcttaaatatcatgacactggcggtgaaccaaggattgaaccc
ctcttaggacaatggaatatgaagaacaagaaaatggtgaatggtggaagagtggaattc
tggacctgtgttaacttctctttgaaggtcaaccaaaatttgcctgttgaattttgtagg
caattaattgagatgtgtgttagcaaaggaatgggattcaaccccaaccccgttcttcca
atacactcggctcatcccaaccaaatagaaagggctcttgctgatgtccacgagcagtgt
actgcaaaactttctaatgagaagaatcagcttcagttgttgataatcattctacctgat
gtcatgggttcatatgggaaaattaaaaggatatgcgaaacagaattgggtattgtatct
cagtgctgtcaaccaagtcaggctgcaaagctacgtagaccgtattttgaaaatgtttcc
ctcaaaatcaatgttaaggttggtggtcgaaatactgtgttaaatgatgctattcaaagg
agtattcctctagtgactgatattcctaccattatttttggtgctgatgtaactcatccg
cctcctggggaggatactaatccgtcaatagcagcagtagtggcttcaatggactggcca
gaggtaacaaagtatagaggaaatgtctctgcacaggctcatcgtgaagaaattatccag
gatctctataaatcatatcacgatccggttagaggattaattcattccggaatgatcagg
gaattatgtatagcatttaggagagcaactgggcataaacccaacaggatgatattctac
agagatggtgttagtgagggccaatttagccaggttttgctacatgagatggatgccata
cgaaaggcttgttgctcacttgaggagggataccttccacgtgttaccttcattgtggtg
cagaaaaggcatcatacacggctttttcctgttcagggtggtgagacagatcacagtggc
aatattcgaccaggcacagttattgataccaagatttgccaccagaatgaatttgatttc
tacctcaacagccatgctggaattcagggaacaagcaggcctgcacactatcatgtgttg
tatgatgagaattgtttcacagctgataagttgcaagttctgactaataacatgtgttac
acgtatgcaaggtgtactcgctctgtttccgtagttcctcctgcctattatgcccactta
gctgcttttcgggctcgatattacattgagggggaaacattggatggtggaccttcaggt
ggtaggagtacaactgggaggagcagggaagttcagccgctgcctgtgatcaaagacaat
gttaaagatgttatgttttattgctga
DBGET
integrated database retrieval system
