Manihot esculenta (cassava): 110625536
Help
Entry
110625536 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110625536
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110625536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110625536
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
110625536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110625536
NCBI-ProteinID:
XP_043817957
LinkDB
All DBs
Position
11:complement(30306128..30312382)
Genome browser
AA seq
1399 aa
AA seq
DB search
MAIEKNSFKGTRFDPEFSPNSRETMSSDEDEVQRGVSAAESDDEDDEFDDADSGAGSDDF
DLLELGETGAEFCQIGNLTCSVPFELYDLLGLEDILSVEVWNEVLTEEERFSLTKYLPDL
DQATFMLTLKELFEGQNFHFGSPIKKLFQMLKGGLCEPRVALYRDGLGFFQKRKHYHLLR
SHQNNMVSSLCQIRDAWLNCKGYSVEEKLRVLNIIKSEKSLMYEKMVEDLESDSSEKEEL
GDGLWRKRVKDRKTVVQQGHNSAYRAGSNLESTPQMPSVGSKVPKYAKQNPKGILKLAAS
KAFSPKETVGRSPSLYRDLDANSRPYGLPAPISRQKVIGFDSRAARKLRNQMIINDDDDN
DDDDAEDAEDAAYTKSVQRDRNVARSGMRDKNGVLKAGKKHGLLRSEELGTDSFTGFPSS
SKNDVHAYVRKGVAAKLPKIQTSHEFGKKATYPENFQQFAIGDRLNSLKGRSTYMKVNQF
DLSEHGEWHGKNQGHAISMDSSLKADDQNMTSKTWKAGREFPDLNYKTYQASSPQLNDRV
LLSDLKAKSSQEKIKANFLQNGGPDKGAKKLNRMYAKNEETESDSSEQFDDGEDDDDDDD
EEEEEEEEEDSYPLARSKLTYPSGIMKGSQTSFLRSSLDAKKGKFVKKDMPENSMAFDGM
TGFSKKMEGFSELEHMPGYSSKAKQKGKMRDSSPLHSSGAKVLKNSSRIGLGKVTDDDDR
KRSHKVGKKGQARESTESLHVSSLRAYPPDRNRKGEVSHDYTIDEEDDSLETRLLADENA
LVRLGKRGQGSEAYVPDRHDRSDAAVKGFNLMTKKRKAKEELSNIDRRNEDGNMQSSLQQ
QIDDSISLKKRGKRKVEADTGISDMETPEPPVTEMGEREMDLDSKPQKKPYTPITPTVHT
GFSFSIIHLLSSVRLAMISPLSEDPLEVVKPSEEQKGKQEGDTKGVVSHKSADVNKADHA
LQVSVPSLTVQEIVNRVRSNPGDPCILEMQEPLQDLVRGVLKIFSSKTAPLGAKGWKALG
VYEKSTKSWSWIGPVSHTLTDHETVEEVTSPEYWGLPHKMLVKLVDSFANWLKSGQETLQ
QIGSLPAPPVSLMQCNLDEKERFRDLRAQKSLNTISPSSEEVRAYFRKEEVLRYSIPDRA
FSYTAADSKKSIVAPLRRCGGKPTAKARDHFMLKRDRPPHVTILCLVRDAAARLPGSIGT
RADVCTLIRDSQYIVEDVSDAQVNQVVSGALDRLHYERDPCVQFDGERKLWVYLHRDREE
EDFEDDGTSSTKKWKRQKKDPADQPDQGAVTVAFHGNVDQSGFDLGSDLNVVPPGSDDTK
RIDPVCNDAKKSMEDNAGSSHVSEQGNLDQGHSMVWDTLSLNSMRENKLLCQENSTNEDF
DDETFGRERPVGLLSASLS
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgagaagaacagcttcaagggtactaggtttgatccagagttttcccccaat
agtagggagaccatgtccagtgatgaggacgaggttcagcgtggagtctctgctgctgaa
tctgacgatgaggatgatgaatttgatgatgcggattctggggcgggatctgatgacttt
gacttgttagaattaggggaaactggggctgagttttgtcaaattgggaatttgacttgt
agtgttccttttgaattgtatgatcttttgggtttggaggatatattgtctgttgaagtg
tggaatgaagttttaactgaggaggagagatttagcctcactaagtatctgcctgatttg
gatcaggccacctttatgctaactctcaaagagctttttgagggtcagaatttccatttt
ggcagccctataaagaagctgtttcagatgttaaaaggaggcttatgtgagcctagggtt
gctctctatagagacggtttgggtttctttcagaagcggaagcattaccatcttttgagg
tctcatcagaataatatggtcagtagtttatgtcagattagggatgcttggcttaattgc
aaggggtatagtgttgaggagaagcttagggttttgaacattataaagagtgagaagagt
ttgatgtatgagaagatggttgaagatttggagagtgattcatcagagaaagaggaatta
ggtgatgggctatggaggaaaagggttaaggacaggaaaactgttgtccaacagggtcat
aattccgcatatagggctggttcgaatttggaatcgactccacaaatgccttcagtgggt
tcgaaagtgccaaagtatgcaaagcaaaatccaaagggtatactgaagttggctgcgtca
aaagcattttcaccaaaggagacagtgggccggtccccttctctttatcgagacctggat
gcaaattctaggccatatggtctgccagcaccaatttctcgtcagaaggtgatcggattt
gactcaagggcagcacgtaagctaaggaatcagatgataattaatgatgatgatgacaat
gatgatgatgatgctgaagatgctgaagatgcagcatacacgaagagcgtccaacgggat
cgcaatgtagcacgcagtggcatgagggacaaaaatggtgttttaaaagcaggaaagaag
catggtctattgagaagtgaggaattaggcactgacagtttcacaggcttcccttcctct
tcaaagaatgatgtacatgcctatgtgaggaaaggagttgcagctaagctacctaagatt
caaacttcccatgagtttggcaaaaaggccacatatcctgaaaattttcagcaatttgct
attggagatcgcctgaattcactgaaaggccgatcaacatatatgaaggttaatcagttt
gacttatcagagcatggtgaatggcatggaaagaaccaaggacatgccatctctatggat
tcctcactgaaagctgatgatcaaaatatgacaagcaagacgtggaaagcagggagggag
ttcccagacctcaattataaaacttatcaagcttcttctccgcagttgaatgatagagtt
ctgctttcggacttgaaagcaaaatcatcacaggagaagatcaaggcaaattttttacag
aatggagggccagataaaggagctaagaaattgaacaggatgtatgcaaaaaatgaagaa
acagaatcagactcatctgagcagtttgatgatggtgaagatgatgatgatgatgatgat
gaggaggaggaggaggaggaggaggaggatagctatcctttggcgagaagcaagttaact
taccctagtggtatcatgaagggttcgcaaacatccttcttaagatctagcctagatgct
aagaagggaaaatttgttaagaaagatatgccagagaattcaatggcttttgatggaatg
acaggtttctccaaaaagatggagggctttagtgagcttgagcacatgccaggatactca
tcaaaagcaaaacagaaaggtaagatgcgagacagcagtccattgcatagctctggagct
aaagttttgaaaaacagctcccggattggcttaggtaaagttacagatgatgatgatagg
aaaagaagtcacaaggtaggcaagaaaggacaggcgcgagaatctactgaaagtttacat
gtatcctcattgagagcctaccctcctgaccgaaatcggaaaggggaagttagtcatgac
tacactattgatgaggaggatgattctcttgaaacacgtctattggcagatgaaaatgca
ctagttagattgggtaaaagaggacaaggcagtgaagcatatgttcctgatcgacatgat
agatctgatgctgcagttaaagggttcaacttaatgacaaagaaacgaaaagcaaaggag
gaattgtccaacattgatagaagaaatgaagatggcaatatgcagtctagccttcagcag
caaattgatgattccatatcattgaagaaaagaggaaaaagaaaagtggaggctgacact
ggcatttcagatatggaaactcctgagccacctgtcacagaaatgggagaaagagaaatg
gatctagattccaaaccacaaaaaaagccatatacaccaattacacctacagttcatact
ggtttctcattttccattatacatcttctttcctcagttcgcctggcaatgatcagtcct
ctctcagaagatcccttggaagttgtcaaacctagtgaagagcagaagggaaagcaagaa
ggtgacacaaaaggtgttgtttctcataagagtgcagatgtaaataaagcagaccatgct
ctgcaggtgagtgtgccatctcttactgtacaagaaattgttaaccgtgtcagatcaaat
cctggggatccttgtattcttgagatgcaggagcctcttcaggatctggtcagaggagtt
ctcaagatattttcatcaaaaacagcccctttaggagcaaagggttggaaggcactaggg
gtttatgaaaaatctacaaagagttggtcttggattggtccagtttctcatactttaact
gatcatgaaactgttgaggaggtaacatctcctgaatactggggccttcctcataaaatg
cttgtcaagttggttgattcatttgctaactggctgaaaagtggtcaagagacactgcaa
caaattggaagtcttccagcaccacccgtgtcgttgatgcagtgtaacctggatgagaaa
gaaaggttcagggaccttagagctcagaagagtctcaacactattagtccaagttctgaa
gaagtgagggcttatttccgtaaggaagaagttctgaggtattccattcctgacagagcc
ttctcatacacagctgctgatagtaaaaaatccattgttgctcccttgagaaggtgtggt
ggcaagccaactgcaaaagcccgagaccatttcatgctaaagcgtgatcgtcctcctcat
gttacaattctttgtcttgttagagatgcagctgccagattgcctggaagtattggcacc
agagcagatgtctgcaccttgataagagactctcagtatattgttgaagatgtgtccgat
gctcaagtgaatcaggtagtcagcggggccctggaccgtttacattatgaacgtgatcct
tgtgtacaatttgatggggagaggaaattgtgggtgtacttacacagagatagagaagaa
gaagattttgaagatgatggtacttcatctacaaagaaatggaagagacagaaaaaggat
ccagctgaccaacctgaccaaggagctgtaactgtggcttttcatggaaatgtggatcag
tctgggtttgatttgggctctgacctcaatgttgtgccaccaggctctgatgatactaaa
agaatagatcccgtgtgcaatgatgcgaaaaaaagcatggaggataatgctgggagtagt
catgtgtcagaacaaggcaacctggatcagggtcattcaatggtttgggatacccttagc
ttaaattcaatgcgagagaataaattattatgtcaagaaaattccacaaatgaagatttt
gatgatgagacttttggaagagagaggccagttggactgctaagtgcaagcttatcatga
DBGET
integrated database retrieval system
