Manihot esculenta (cassava): 110625666
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Entry
110625666 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110625666
KO
K13130
gem associated protein 2
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110625666
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
110625666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
110625666
NCBI-ProteinID:
XP_043817758
LinkDB
All DBs
Position
11:27266345..27278093
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AA seq
772 aa
AA seq
DB search
MMADDADSDACVGTKRRMTEIEETLLQQQEEPSASISAQEEEVSKESSFTSSSPQEDQEI
VQDIHSPTSSKKVKCSVIQPYNCIEENQGTLGCVDEGKVISCDLVSSSIGCEGNIADFAR
TVENLGMQVQETNNCMMDSVFGSEKGQGEIEGTLNDGKSEKEGQLGSAKSEMGFHGAEEV
DKHRALDLGDHKGTEIEIGSVIVEECFVKGKAEAETLLDAKKKQLLAKLEAGSIFKDKSH
MEKVPVPNLTAGILEGLKRIDESVRPSLKVEVIDDTALIETVPVPKTGNVGVKVAERKGK
KNEKQEADEKKAKRPRRKGKDGKKILEPSYEQNQMIPVRKAINNTSQVGEAQNGGKKDGD
QIRKYSREEMEALRFVNIVDQRRLWRLIHTGLGDAVVKEYNDLTGSKHQKNICVNFDPRQ
LFGRKEVAPGILGEMSSENVDSKLKNTEEDEVESLNILGPSHESFGGEDACTFLEEECNE
DEDSDEDYASIQRPAFLVEGEPDFESGPPEDGLEYLRRVRWEAAHIPKVKVAKHDKSKVH
KEQSVYMPQIPEIAKCPENLMPLKRWEDAFLADFSELRMFSSRNEASGTEISCKLQSLSI
VHEQNTSSPQLAESIILEKFNNLVADEVDSSLDDSCLNDTVDQSSSANAEGGKALAYSQH
KSLRSSTSESSSNYPTLSAILAMDSVARASALRKRITQAETMTTLSKNDCLWLFALCAAV
DTPLDADTSAALRSLLRKCASLRAAKCELDDEVIMLNILATISGRYFGQSES
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgacgatgcggactctgatgcatgcgttgggaccaagaggagaatgacagag
atcgaagaaactcttcttcagcaacaagaagaaccctccgcttctatctctgcgcaagag
gaagaggtttcaaaagaatcgtcttttacttcttcatccccacaagaagaccaagaaatc
gtgcaagacattcacagtcccacttcctctaagaaggttaaatgctctgtcattcaacct
tacaattgtattgaagagaatcaaggaactttaggttgtgttgatgagggcaaggtcatt
tcttgtgatttggtttcttcgtctattggatgtgaagggaacattgcagattttgccaga
acagttgagaatttgggtatgcaggtgcaagaaacaaataattgtatgatggattctgtc
tttggtagtgaaaaaggccaaggagagattgaagggaccctcaacgatgggaagagtgag
aaagaagggcagctgggttctgccaaaagtgaaatgggtttccatggagctgaagaagtt
gataaacatagagccttagacttaggagatcacaaaggaactgaaattgaaataggttct
gtcattgtagaggagtgtttcgtgaagggaaaagcggaagcagagactttgctggacgcc
aaaaagaagcaattattggcaaaacttgaggctggttcaatctttaaagataaaagccat
atggaaaaggttccggttcccaaccttactgcaggaatcttggagggtctcaaaagaatt
gacgaatctgttagaccttcactgaaggtcgaagtaattgatgatacagcactgattgag
accgttccagtccccaaaactgggaatgttggtgtaaaggttgcagagaggaaaggaaag
aagaatgagaaacaagaagctgatgaaaagaaggcaaaacgaccacgaagaaaagggaag
gatgggaaaaagattttggagcctagttatgaacaaaaccagatgatcccagttcgcaaa
gccatcaataacacgagccaggttggtgaagctcaaaatggtggtaaaaaggacggggat
caaataagaaaatactcaagagaggagatggaagccctgcgatttgtgaacattgtagac
cagagaaggttgtggagactgatacacactggacttggagatgctgttgtaaaggagtat
aatgacctgacaggctcaaagcatcagaagaacatatgcgttaactttgatcctcgtcag
ctctttggaaggaaggaagttgcccctggaattcttggggaaatgtcttctgagaacgtt
gacagtaaattaaaaaacactgaagaagatgaggtagaaagtttgaatatattgggtcct
tctcacgagagttttggtggtgaagatgcctgcacttttttggaagaagagtgcaatgaa
gatgaggacagtgatgaagattatgcaagcatccagagacctgcttttcttgtagaagga
gaaccagattttgaatctggacctccagaagacggtttggaatatcttaggcgtgtcagg
tgggaagctgctcatattccgaaagttaaagtggccaagcatgataagagtaaagttcat
aaagaacaaagtgtttatatgccccagattcctgagattgccaagtgcccggaaaattta
atgccattgaagcgatgggaggatgcatttcttgctgatttttcagagttaaggatgttt
tcatcacgcaatgaggcttccggcactgagatttcatgtaaactgcagtccttgtctatt
gttcatgagcagaacacttcctctcctcagcttgctgaaagtattatccttgaaaaattt
aataaccttgtagctgatgaagtcgattccagtctagatgattcctgtctcaatgacaca
gttgaccaatcatcttcagcaaatgctgaaggtggtaaagcattagcatattctcagcac
aagtcccttagaagttctaccagtgaatcttcttccaactaccctactttgtcggcgatt
ttagcaatggattctgttgcacgagcatcagcgcttaggaaacgcataacccaggcagaa
accatgacgacactatcaaaaaatgattgtctatggctctttgctttatgtgcagcagtt
gacactccactggatgctgacactagtgctgctctacgaagcctcctccgcaagtgtgct
agcttgcgagcggcaaagtgtgaacttgatgatgaggttataatgctgaatattcttgcc
acaatttcaggcaggtattttggacagtctgaaagctga
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