Manihot esculenta (cassava): 110625835
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Entry
110625835 CDS
T05761
Name
(RefSeq) pleiotropic drug resistance protein 2 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110625835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110625835
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
110625835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_22
AAA
AAA_33
Rad17
AAA_30
RsgA_GTPase
AAA_18
TsaE
AAA_23
NACHT
AAA_25
nSTAND3
AAA_5
AAA_7
AAA_28
cobW
T2SSE
RNA_helicase
RuvB_N
AAA_17
NPHP3_N
NTPase_1
AAA_19
AAA_11
AAA_24
Viral_helicase1
ATPase_2
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
110625835
NCBI-ProteinID:
XP_021627188
LinkDB
All DBs
Position
11:complement(32470575..32478823)
Genome browser
AA seq
1453 aa
AA seq
DB search
MAAAFAGDDLARQMSSRSWRRSTSIREMWNEPDVFQRSSRRPLPMDDEKELRWAAIERLP
TYDRMRKGVLTQVMSNGRMVHNEVDMTRLGTQDKKKLMDSILKVVEEDNEKFLRRLRNRT
DRVGIEIPTIEVRIQHFSVEGDAYVGSRALPTLLNSTLNAIEGVLEMIGLSPSKKRTIKI
LQDVNGIVRPSRMTLLLGPPGSGKTTLLKSLAGKLDDDLKVTGKVTYCGHELWEFTPQRT
CAYIGQHDLHCGEMSVRETLDFSGRCLGVGTRYYMLSELSRREREAGIKPDPEIDAFMKN
TSMAGQATNLITDYVLKILGLDICADIMVGDDMRRGISGGQKKRVTTGEMLVGPAKAFFM
DEISTGLDSSTTFQIVKFMRQMVHIMDVTMVISLLQPAPETFDLFDDVILLSEGQIVYQG
PRENILEFFKYVGFKCPERKGIADFLQEVTSKKDQQQYWFRKNQPYRYISVPEFVRAFKI
FYVGQQLSADLRVPFDKYRTHPAALVKEKYGISNWELFKAGFAKEWLLMKRNSFVYIFKT
TQITIMAIIALTVFFRTEMKYGQIADGGKFFGALFFSLINVMFNGMAELAMTVFRLPVFY
KQRDFLFYPAWSFGLPIWLLRIPISLMESGIWIILTYYTIGFAPAISRFFKQFLAFVGIH
QTALSLFRMIAALGRIEVVANTLGSFTLLLVFVLGGYIVSKNDISSWIIWGYYISPMMYG
QNAIAINEFLDRRWSTPTGNPTEPTVGIALLKERGLFTTEKAFWICIGALFAFSILFNIL
FIVALTYLSPFGDNKAVIVDDDSDKNATRHLASNQEGIDMAVRNARGGINSNISRINQAR
KGMVLPFLPLSLAFNHVNYYVDMPAEMKNQGVEESRLQLLRDVSGAFRPGILTALVGVSG
AGKTTLMDVLAGRKTGGYIEGSINISGYPKNQATFARVSGYCEQNDIHSPYVTVYESLLY
SAWLRLSADVNKATRKMFVEEVMELVELNSLKNALVGLPGVDGLSTEQRKRLTIAVELVA
NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG
GQVIYAGPLGRHSHKLVEYFEGVPGVPKIKEGYNPATWMLEVSSTSVEAQLDVDFAEIYA
NSDLFRRNQELIKELSTPQPGSGDLYFPTQYSQSFIIQCKACFWKQHWSYWRNSRYNAIR
FFMTTMIGVIFGVIFWNKGGQIQTRQELTNLLGATYAAILFLGGSNASAVQSVVAVERTV
FYRERAAGMYSELPYAFAQVAIETIYVAIQTFIYTLLLYSMIGYEWEVDKFFYFYYFIFM
CFTYFSMYGMMVVALTPGHQIAAIVMSFFLSFWNLFSGFLIPRPLIPIWWRWYYWASPVA
WTIYGIFASQFGDKKSVLEIPDEPSTTVDLFLKNGFGYDHDFLVAVVIAHIGWVLLFFFV
FAYGIKFLNFQRR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcctttgccggagatgacttggcaaggcaaatgagtagtaggagctggagg
cggtccacgagcataagggaaatgtggaatgagccagatgtgttccagagaagctcaagg
cggccattaccgatggatgatgagaaggagttgcggtgggcagccatagagaggcttcca
acttatgataggatgaggaaaggggtacttacacaggttatgagcaatggcaggatggtg
cataatgaagttgacatgacaaggcttggaactcaagataagaagaaattgatggatagt
atacttaaggttgtcgaggaagataacgagaagttcttgaggaggctcaggaacagaact
gacagagtagggatagagattccaacaattgaagtcagaattcagcatttttcagttgag
ggagatgcatatgttggtagcagagcacttccaactttgcttaattccaccttgaatgca
attgagggagttcttgaaatgattgggctttctccatcaaagaaaaggacaatcaagata
ctccaagatgttaatggaatagtaagaccatcaaggatgacactacttctcgggcctcct
ggatctggaaaaacaactctgttaaaatcacttgctgggaaactagatgatgatctgaag
gtaacagggaaagtcacctactgtggtcatgagctttgggaatttacacctcaaaggacc
tgtgcttatattggccagcatgaccttcactgtggtgaaatgagtgttcgtgagacactt
gatttctcagggcgttgcttgggagtgggaaccaggtattacatgctgtcagagctgtca
agacgggagagagaagcaggtatcaaaccagatcctgaaattgatgcattcatgaaaaac
acttctatggcaggccaagcaaccaatttgattacagactatgttctaaagatacttgga
ttggatatttgtgctgatatcatggtgggagatgacatgagaaggggtatctctggcgga
caaaagaagcgtgtaactacaggagaaatgttggtaggaccagcaaaagcatttttcatg
gatgaaatatccacagggttggatagttccacaactttccaaattgttaagttcatgaga
cagatggttcacataatggatgttactatggtcatctctctcttgcagcctgcacctgaa
acatttgatctctttgatgatgttatcctactttccgaaggccagattgtctaccaaggt
ccacgtgagaacattcttgaattcttcaaatacgtgggttttaaatgtcctgaaaggaaa
ggtattgctgacttcctgcaagaagtaacttccaagaaggaccaacaacaatattggttc
agaaaaaatcaaccttacagatacatatcagtaccagagtttgtaagagccttcaaaatc
ttttatgttggccagcagctttcagcagatctcagagttccctttgataaatacagaaca
catcctgctgctttggtgaaagaaaagtatggcatctccaattgggaactgttcaaggca
gggtttgcaaaagaatggctactgatgaagcgaaactcttttgtttacatatttaaaact
acccagataacaatcatggctataattgcattgactgtgttctttagaacagagatgaaa
tatggccaaattgctgatggaggaaagttttttggagcactgttttttagtcttattaat
gtcatgtttaatgggatggcagagcttgcaatgactgtttttaggcttcctgtgttctac
aagcagagagatttcttattttatccagcatggtcttttggattgcctatttggctcctc
agaattcctatctcactgatggaatctggtatttggatcatccttacatattacaccatt
ggctttgcccctgctatcagtagattcttcaaacagttcttggcttttgttggcatacat
caaacagctctctctctttttcgtatgatagcagctcttggaagaattgaagtagttgca
aatacacttggttcctttaccttgctgttggtttttgtgcttggaggctacattgtttca
aaaaatgacatatcatcatggattatatggggttactatatttctcctatgatgtatggg
caaaatgccattgcaatcaatgagttccttgacagaagatggagcacaccaactggcaat
cctaccgagcctacagttggaattgcccttcttaaggagagaggcctgttcactactgag
aaggcattttggatttgtattggagcactttttgcattttctattcttttcaatattctc
ttcattgtagcattgacatatttaagtccttttggtgataacaaggctgtaattgttgat
gatgactctgacaaaaatgctacgcggcatttggcatctaatcaagaaggaattgacatg
gcagtgagaaatgctcgagggggtattaactcaaatattagcagaattaatcaagctaga
aagggaatggtcttgcctttcctacccctttcacttgctttcaaccatgtgaattattat
gtggatatgcctgcagaaatgaagaaccaaggagttgaagagagcaggttgcaacttctg
cgagatgttagcggtgcttttaggcctggtattctaacagcattagtaggtgtgagtggt
gctgggaagacgactctaatggatgtcttagcaggaaggaagacaggtggatatattgaa
ggaagcataaacatttctggttatccaaagaaccaagcaacatttgcaagggtcagcggt
tattgtgaacaaaatgacatccattcaccatatgtaacagtttatgaatctctcttatat
tctgcctggcttcgactttctgctgatgtaaataaagcaacacgaaagatgtttgttgag
gaagtaatggagttggttgaacttaactccttaaagaatgctctagttggtcttcctgga
gttgatggtctttcaactgagcagaggaagagactgactatagctgtagagttggttgct
aatccatcaattatctttatggatgagcccacatctggtcttgatgctagagctgcagca
atcgttatgcgtacagtaaggaatacagtggacacaggacgaactgttgtttgtacaatt
caccaaccaagcattgatatctttgaagcttttgatgagctgttactgatgaaaagagga
ggacaagtgatatatgctggaccacttggtcgacattctcacaagcttgtggaatacttt
gagggtgttccaggggttcccaagatcaaggaaggttataatcctgctacctggatgtta
gaggtgagctctacttcggtagaggctcaactggacgttgattttgcagaaatctatgca
aactctgatctctttaggagaaaccaagaactcatcaaagaacttagcactccacaacca
ggttccggggatctttatttccccactcaatattcccagagctttataattcaatgcaaa
gcttgtttctggaaacaacactggtcatactggcggaactctcgatacaatgccattcgg
ttcttcatgacaactatgattggagtaatttttggtgttatcttctggaataaaggaggc
cagatacaaacacgacaggaactgaccaatctgcttggagctacctatgctgctattctt
ttccttggaggcagcaatgcttctgctgtgcaatctgttgtggcagtagaaagaacagtt
ttctatcgtgaaagagcagcagggatgtattcagagttgccttatgcttttgctcaggtg
gctatagagaccatttatgttgcaattcaaacctttatttatactcttcttttgtactca
atgattggatatgagtgggaagtggacaaattcttctatttctactacttcatcttcatg
tgctttacctacttctcaatgtatggaatgatggttgttgccctcactcctggccatcaa
attgcagcaattgttatgtccttcttcctgagcttctggaacttgttctctggtttcctc
atcccccggccacttatccctatatggtggagatggtattactgggcatctccagttgct
tggacaatatacggaatttttgcatctcaatttggtgacaagaaatctgttcttgagatt
cctgatgaaccatcaacaactgtggatttattcctaaagaatggttttggttatgatcat
gacttccttgtagctgtagtgattgcccatattggttgggtcctccttttcttctttgtc
tttgcatatggcatcaagtttcttaactttcaaaggcgatga
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integrated database retrieval system
