Manihot esculenta (cassava): 110626168
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Entry
110626168 CDS
T05761
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110626168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110626168
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110626168
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
U-box type E3
110626168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
MLKL_N
zf-RING_UBOX
Neurochondrin
zf-Nse
Arm_2
zf-C3HC4_4
HEAT_EZ
zf-C3HC4_2
KAP
MCAfunc
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110626168
NCBI-ProteinID:
XP_021627632
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All DBs
Position
11:29603881..29608751
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AA seq
665 aa
AA seq
DB search
MEEEKGAVVQSLIDTVNEIASISDYRVTVKKQYCNLARRLKLLTPMFEEIRESKEPIPEE
TAKALVLLKQALDSAKELLKFGSEGSKIYLVLEREQIMKKYHDVTTQLEQALSGISYENL
DISDEVKEQVELVHAQFRRAKGRVDPPDVELYEDLLSLYNKSKDAAIDPAVLRRSSEKLQ
LKGIADLTQESIALHEMVAATGGDPEENIEKMSMLLKKIKDFVQTENPNMDTPASERSHP
PNGSGQASANGNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERACIEKWLEAGHTTCP
KTQQALNGTALTPNFVLRSLIAQWCEANGIEPPKRPSSSRCNKTSSAYSPAERTKIEILL
HKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHAVTAL
LNLSICEDNKGSIISAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSSGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEAL
AILAILASHPEGKAAIGSAEAVSVLVEVIGNGSPRNRENAAAVLVHLCAGDQKYLAEAQE
LGVMGPLVDLAQNGTDRGKRKAQQLIERMSRFVGQQKQAQAQTETQSQVQTQQPQPSSIS
NPADK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaaggggcagtagttcagagtttgattgatacggtgaatgagattgct
tcgatctctgattatagagttacggtgaagaagcagtattgcaatttagcgagaagattg
aagcttttgacgccaatgttcgaggagattagagaaagcaaggagccgattcctgaagag
actgcgaaagctttagttttgttaaaacaggctctggattcagcaaaggagttgctcaaa
tttggcagcgaaggcagtaagatttacctggtcttggagagggaacaaattatgaaaaag
tatcacgatgtgacaactcaactggaacaagctctaagtggaatttcctatgaaaacctt
gatatatcagatgaagttaaggaacaggttgagcttgtccatgctcagttcaggagagcg
aaaggaagggttgatcctcccgatgtggagctgtatgaagatctattatccctttataac
aagagcaaagatgcagcaatagatccagctgtcctaagaagatcatctgagaagttacaa
ttgaaggggatagctgaccttacacaagagtcaatagccttgcatgaaatggttgctgcc
actggcggtgatcctgaggaaaacattgaaaaaatgtcgatgctattgaagaaaattaag
gattttgtacaaacagaaaaccccaacatggacactcctgcaagtgaaaggagccatcct
ccaaatggcagtggacaagcttccgccaatgggaatcacaaggccccagttataccagat
gacttccgctgtccaatatccctggaattgatgaaagatcctgttattgtttcaacaggc
cagacctacgagcgtgcctgcattgagaagtggctggaagcaggacataccacatgtcca
aagactcaacaggccctcaatggtactgctctcacacccaactttgtactgcgcagcctc
atagcccagtggtgtgaagcaaatgggattgaaccaccaaaacgacccagcagttcacga
tgtaacaaaacctcatcggcctactcacctgctgagcgtacaaagattgaaattctcctt
cacaaactcacttctggtagccctgaagaccagcgttctgctgcaggtgagatccgcctt
cttgccaagcggaatgcagataatcgtgtggcaattgctgaagctggtgcaatccctctc
cttgtgggccttctctcaacacccgattctcgaatccaagaacatgctgttactgccctt
ctcaacctttctatatgtgaagataacaaaggaagcatcatatcagctggggcagttcct
ggtattgtacatgtgctcaagaagggcagcatggaagctcgggaaaatgctgcagccacc
cttttcagtctttcggttgtggatgaaaataaagttacaataggttcttcaggagctatc
cctccacttgtgacacttctaagtgagggtacacaaagggggaaaaaagatgctgcaaca
gcacttttcaacttgtgcatctatcaggggaacaagggaaaggcagtgagggctggagtt
gtgcccacactaatgcgtctgctgacagaacctggaggtggaatggtggatgaagcactt
gctattttagctatactagctagccaccctgaagggaaggcagccattggatctgcagag
gcagtgtcagttttggtggaagttattgggaacggatccccaaggaacagggagaacgca
gctgcggttttggtgcacctttgtgccggcgaccagaaatatttggcagaagcgcaagag
cttggagtaatggggcctctagtagatttggcccaaaatggaacagaccggggaaagagg
aaggcgcaacagttgattgagcgaatgagcaggtttgttgggcagcaaaagcaggctcag
gcacaaactgaaactcaatctcaggttcagactcagcagccccagccatcctccatatca
aatcctgctgataaatga
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