Manihot esculenta (cassava): 110626178
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Entry
110626178 CDS
T05761
Name
(RefSeq) DNA repair protein RAD51 homolog 4 isoform X1
KO
K10871
RAD51-like protein 3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110626178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110626178
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
110626178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
DnaB_C
ATPase
ATPase_2
AAA_22
ABC_tran
CobU
AAA_24
AAA_16
PAXNEB
Motif
Other DBs
NCBI-GeneID:
110626178
NCBI-ProteinID:
XP_021627642
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Position
11:30046566..30050390
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AA seq
314 aa
AA seq
DB search
MAPLKSLEARYPLLDSNFQSFCASNGIFTVEDFLLHDLSVLTAFAEQQPNSDRLKEGITQ
LLSIIDRQHQPWLNGLQLLEDARQNKHVLSTGFEEIDKLLGGGVREGQLTELVGPSSSGK
TQLCLRVAANVAIQHVGRVIFMDTGNSFSPRRIEHFIHQISDSVLSEKVMSNILCYSTFD
IFSMFDVLQQLENSLKSQGPKGDCKVQMLIVDSISSLITHVLGGSGPQGHALMTAAGFLL
KKLAHEHNIAVLVTNHMVAGEGGTLKPALGESWKSIPHVRLLLSRDPGNKISNISILKHP
SLASGEVARFVIDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattaaaatctctggaggctcggtaccctcttttggactccaatttccaatcc
ttttgtgcttcaaatggcattttcacagtcgaagatttcctcctacatgacctcagtgtg
ttgactgcatttgcagaacaacagccaaactcagatagattgaaagaggggatcacccaa
ctcctttctatcatagacaggcagcaccagccatggttgaatggcttgcagttgttggaa
gatgctagacagaataaacatgttttatctactggatttgaggagattgataagcttctt
ggaggtggagtgcgggagggacagttgacagaactggttgggccatcgtcatccggtaaa
acccaactttgcttacgagtagctgcaaatgttgcgatacaacacgtgggtagagttatt
ttcatggatacaggcaactctttctcaccacgacgtattgaacactttattcatcagatc
tctgattctgtattaagtgagaaggtaatgagcaacatattgtgctactctacatttgat
atattttcaatgttcgatgtgctacagcagctagagaacagtttgaaatctcaggggccc
aaaggagattgtaaagtacaaatgctaattgttgattcaatctcatcattgataactcat
gtccttggaggaagtggtccacaaggacatgctctgatgacagctgctggctttttattg
aagaagttagctcatgagcataatattgcagtgctggtgactaatcatatggtggctgga
gagggaggtactcttaaaccagctcttggagagagttggaagagcattccacatgtgagg
cttctgctttcccgtgacccgggaaacaaaatctccaatatttccatactaaaacaccct
tccctagcttctggtgaggttgcaagatttgtgattgatgactaa
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