Manihot esculenta (cassava): 110626357
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Entry
110626357 CDS
T05761
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110626357
03041 Spliceosome [BR:
mesc03041
]
110626357
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110626357
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110626357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
110626357
NCBI-ProteinID:
XP_021627891
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All DBs
Position
11:complement(1718684..1723955)
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AA seq
422 aa
AA seq
DB search
MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPI
KVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRG
FGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGAGTNDDKQSLDAKSVVELTNGTS
EDGKETTNNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGF
VRYSTHAEAALAIQVGNNQSILCGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATD
LLTYERQLAMSKMGGVHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggcttaaacagcagcaacaagctctgatgcaacaagctctccttcaa
caacagtctctctatcaccctggacttctcgctcctcctcagattgagccaattcccagc
ggaaatctgcctcctggttttgatcctagcacttgccgcagtgtctatgtggggaatatc
cacacacaggtaactgaaccacttctccaagaagtttttgcaagtactggacctgttgaa
ggctgtaagcttattagaaaggaaaagtcatcctatggatttattcactactttgatcgc
agatcagctgctcttgctatattatctcttaatggaaggcatctatttgggcagcccatc
aaagttaattgggcatatgctagtggtcagcgggaggatacatcaggtcattacaacata
tttgttggagatcttagccctgaggttactgatgcaacactctttgcctgcttttcagtt
tatagcagttgctcagatgcaagggttatgtgggatcagaagactggacgctcaagaggc
tttgggtttgtttctttccgaaatcaacaggaagcccaaagtgccataaatgacctaaca
gggaagtggcttgggagtagacagatacgttgtaactgggctacaaaaggtgctgggacc
aatgatgacaaacaaagcttggatgccaaaagtgtggtggaactaacaaatggcacatca
gaagatggtaaagagaccactaataatgaggctcctgaaaataaccctcagtatacaact
gtttatgtgggaaatcttgctccagaagttacccagcttgatctccaccgccacttccat
tctcttggtgccggagttattgaggaggtcagagtccagagggataaaggatttggtttt
gtgagatacagtactcatgctgaggcagctctagctattcaggtgggaaacaatcagtca
attctttgtggcaaacaaataaagtgctcttggggcagcaagcctacaccaccagggaca
agttctaacccgctccctccgcctgcagctgcacctttaccaggcctctcagctactgac
cttttgacatatgagcgacaattagcaatgagcaagatgggtggtgtgcatgcgttgatg
catcctcaggggcagcatcctcttaaacaagcagcaatgggaatgggtgcagctggagca
agccaggcaatatatgatggtgggtttcagaatgttgctgctgcacagcaactcatgtac
taccagtaa
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