Manihot esculenta (cassava): 110626392
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Entry
110626392 CDS
T05761
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110626392
Membrane trafficking [BR:
mesc04131
]
Protein recycling
Others
EARP complex
110626392
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
110626392
NCBI-ProteinID:
XP_021627932
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Position
11:complement(32077451..32093853)
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AA seq
1127 aa
AA seq
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MQQPNLFPFGTVFGNPFLLNGDLNEAGVGGFESSRVFFLVPFLLFQGGGMDLSKVGTKIL
SSVRSARSLGLLPSTSDRPEVPARAAAAAAVARVLAGLPPHQRFSLPSSSEELLSIYGSR
SQGQVVEELEEDFYKEDFDPIRHILEHIPSEENDAGYFEKQAALRLAQLDRVAERLSHQV
MEHHEVMVKGMNLVRELEKDLKVANVICMNGRRHLTSSRNEVSRDLIVNSYSKKKQALLD
VLPILSDLHHALYMQAALESLVEEGNYCKAFQVLSEYLQLLDSFSDLSAIQEMSRGVEVW
LGRTLQKLDSLLLGVCQEFKEESYITVVDAYALIGDISGLAEKIQSFFMQEVLSETHSVL
KNILQEDREVEKQNSRLTYSDLCIQIPDSKFRQCLLRTLAVLFRLMCSYHEIMIFQLENK
VWASQKSNMKLRECSNTEQPGEAQQIDSASGISPDPEEMNGSISKSVDSMMTEEPITAVS
KADHTGITNASYSDSHNQVDEARSDSSGASSSGSPWYHLRKDATAFVSQTLQRGRKNLWQ
LTTSRVSVLLSSSAVGSMSIHQFLKNYEDLNVFVLAGEAFCGVEAVEFRQKLKVVCENYF
VAFHRQNIHALKMVLEKENWLKLQSDTVKTISFDGLVGDGAPLIVPSGADPTNIRLRHSH
KPLNLIDPTAEKNGFTSWLRNGNPFSLKLMHTSREGHSSSPLNGAISNEYDGHANDGYHA
DLMSPKSSDINHSNGSPGSEDENEDLLADFIDEDSQLPSRISKLNHSRSNSVHWKNDEIT
AQTGSSICLLRSMDKYARLMQKLEIVNVEFFKGICQLFEVFFYFIFETFGQQNSNSNGKG
SSDSVNYRLKMALSRISQDCDQWIKSQATSSPTSLSANMHADLTPTNPQNHSPAMSFSLK
DTCAATDSISLVARILRRSKTHLQSMLLQNNPAIVEDFYAHLVDSVPDLTEHIHRTTARL
LLHINGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIHKEVQDILLEYG
LEIVAETLIEGLSRVKKCTDEGRALMSLDLQVLINGLQHFVSVNVKPKLQVVETFIKAYY
LPETEYVHWARAHPEYTKNQIVGLINLVATVKGWKRKTRLEIIEKIE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcccaatctcttccctttcggtaccgtctttgggaatccgtttctactcaat
ggtgatttgaacgaagctggtgtcggtggatttgagagctctagggttttctttttggtt
ccctttttgttgttccaaggaggtgggatggatttgtccaaggttggtacgaagatttta
agttctgttcgttccgctagatcgcttggtctcttgccttccacctctgatcgccctgag
gttcctgcacgagctgcagctgctgccgcagttgcacgtgttcttgctggactgcctcct
catcagcgatttagtcttccatcaagttctgaagaattactctcaatatatgggagcaga
tcacagggtcaagtggtggaggaactagaagaggacttctataaagaggattttgatcca
attagacacattttagagcatattccatctgaagaaaatgacgcaggctattttgagaaa
caggctgctcttaggttagcgcaattggatagagtagcagaacgtttatcccaccaagtg
atggagcatcatgaagtaatggtgaaagggatgaatttggtcagggaattagagaaggac
ttgaaggttgcgaatgttatctgcatgaatggaagaaggcacttaacctcatcaaggaat
gaggtctcgagggatctcattgtaaattcttattccaaaaagaaacaagctctcctggat
gtgcttcccatattatctgaccttcatcatgcattgtacatgcaagcagctcttgaatcc
ttagttgaagaaggaaattattgcaaggcattccaagtcctatctgaatatttacagcta
ttagatagtttttcagacctctcagccatacaggagatgagccgtggagttgaggtttgg
ttgggaagaacccttcaaaagctggattcacttttattaggagtgtgccaggagttcaag
gaagagagttatataactgtggttgatgcttatgctttaattggagatatctctggtctt
gctgaaaagatacagagcttctttatgcaggaagttctatcagaaactcactctgtgttg
aagaatattttgcaagaggaccgagaagtagaaaagcagaatagcagactcacctacagt
gatctatgcattcagatacctgattctaagttcaggcagtgtttgttgagaacattagcc
gtcttattcaggttgatgtgttcctatcatgagatcatgatctttcagctggagaacaag
gtttgggcatcccaaaaatcaaatatgaagctaagggaatgtagcaacaccgaacaacct
ggagaggcccagcaaattgattctgcttcaggaatttctcctgatcctgaagaaatgaat
ggttctatctccaaatctgtggacagcatgatgacggaggaacctattactgctgtatct
aaggcagaccatacgggaattacaaatgccagttattcagattctcataatcaagttgat
gaggctaggagtgacagcagtggggcatcaagcagtggatccccttggtatcatctgcgg
aaagatgctaccgcttttgtctcacaaactcttcagagaggtcggaagaatctttggcag
cttacaacgagtcgagtatcagtattactttcttcttctgcagttggttcaatgagcatt
caccagttcttgaaaaattatgaagatttaaatgtattcgtcttggctggtgaagccttc
tgtggagttgaagcagtggagtttaggcagaagttgaaggttgtttgtgagaattatttt
gtagcatttcatcggcaaaatattcatgcacttaaaatggttttggaaaaggaaaattgg
ctgaaattacaatcagatactgtaaaaacaataagttttgatgggcttgttggggatggg
gcacccttgatcgttccatcaggtgctgaccccactaatatcagattgcgtcattctcat
aaaccattgaatctgattgaccctactgctgagaagaatggttttacaagttggctcaga
aatggaaatcccttttccctaaaattaatgcacacttccagagaaggccatagttcatcc
ccacttaatggcgcaatttcaaatgaatatgatggacatgcgaatgatggttatcatgct
gatttgatgtcccccaaaagtagtgatatcaatcattcaaacggatctcctggttcggaa
gatgagaatgaagatctacttgcagacttcattgatgaggatagtcaactcccaagtcga
atttcaaagctaaatcattcaagaagtaactctgtccactggaaaaatgatgagataact
gcacaaacgggatcatctatttgtcttctaaggtcaatggacaaatatgcaaggctcatg
cagaaactagaaatagtgaatgttgagttttttaaggggatatgccagttgtttgaggtt
tttttctactttatatttgaaacctttggtcaacaaaactccaactcaaatggaaaaggt
tcatctgattctgtgaattatcgactgaagatggccttatccagaatatcacaggattgt
gaccaatggataaaatctcaggcaacatcttcgcccacatctttaagtgcaaatatgcat
gcagatttaacacctactaatcctcagaatcattcaccagccatgtctttcagtctgaag
gatacgtgtgcagctactgatagcatctctcttgttgctcgaatattgcgcagatccaaa
acccatcttcagtcaatgcttcttcaaaataatcctgctattgtggaggatttctatgca
cacttggtggattctgtaccagatcttacagagcatatacataggacaactgcaagacta
cttttacatattaatgggtatgttgaccggattgctaatgctaaatgggaagtaaaagaa
cttggactagagcataacgggtatgttgatttgttgttgggagaatttaagcactataaa
accaggcttgctcatgggggaatccacaaggaggttcaggacatcctcctagaatatggt
ctcgaaattgtggctgagactctcattgaaggtctctctcgggtgaagaagtgtactgat
gaaggccgagctctcatgtcattggatcttcaggttttgatcaatggcttacaacatttt
gtctctgtgaatgtgaagccaaagttgcaagtagttgaaactttcatcaaggcttactac
cttccggaaaccgagtatgtgcattgggcccgtgctcacccagaatatactaaaaatcaa
attgttgggttgattaaccttgttgccacagtgaaaggttggaagaggaaaaccaggttg
gaaataatagagaagattgaatga
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