Manihot esculenta (cassava): 110626413
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Entry
110626413 CDS
T05761
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110626413
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110626413
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110626413
03036 Chromosome and associated proteins [BR:
mesc03036
]
110626413
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110626413
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110626413
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110626413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
110626413
NCBI-ProteinID:
XP_021627978
LinkDB
All DBs
Position
11:2724850..2735495
Genome browser
AA seq
515 aa
AA seq
DB search
MNGGDEVAAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDTKDHGGSRRDLERMDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISEMNVDSSKAVGNGCIASSSNSNSAK
PYLANGGCPEKSSSFPSNDFNFPPGGIPFLHLPVVVTSSETSLVARCRRVYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPNQCNM
LAYSSSRGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHIL
SRDYMTLKLWDINMDSGPVAAFQVQEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCAPGSSEATTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAESPGVDAN
GNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatgaggtcgctgcagctccagcgggcccaccacagcctttggagtgg
aaattctctcaggtgttcggtgagcgcaccgccggagaagaagtacaagaagttgatatc
atttcagctattgaatttgataaaactggtgatcatcttgctactggtgaccgtgggggc
cgtgtagttctatttgagaggacagacacaaaggatcatggtggatccagaagggatttg
gaaagaatggattatcctattagtaggcaccctgagtttcgttataaaacagagtttcag
agccatgaacctgagtttgactatctcaagagcttggaaattgaggagaaaataaacaaa
atcagatggtgtcaaacagccaatggtgctctttttctcctatccactaatgataaaacc
attaagttttggaaggtccaagaaaagaaggtgaagaaaatttctgaaatgaatgtggac
tcttcaaaagctgtaggaaatggttgtattgctagttcaagtaactcaaatagtgctaaa
ccttatcttgcaaatggaggttgtccagagaagtcatctagtttcccaagcaatgacttc
aatttcccacctgggggcattccatttctgcacttacctgtggtagtaactagcagcgag
accagcttggtggccagatgccgaagggtatatgctcatgcacatgattatcacatcaat
tcaatttcaaataacagtgatggtgaaacatttatatcagctgatgacctgcgaatcaat
ctttggaacttggaaattagcaatcaaagttttaacattgttgatgtgaaacctgcaaat
atggaggatctaaccgaggttataacatctgcagaattccaccccaatcagtgcaatatg
ttagcatatagcagttcaagaggctcaatccgactcattgatttgcggcaatcagctctt
tgcgactctcatgccaaattgtttgaggaacaggaggcaccaggctctaggtcatttttc
acagaaataatcgcttcaatctcagatataaaatttgctaaggatggacggcacatactt
agtcgtgactacatgactctcaagttatgggacatcaatatggattcgggtccagttgca
gccttccaggttcaggagtacttaagacctaagttgtgtgacttgtatgaaaatgattca
atctttgataagttcgaatgttgtttgagcggtgatggattgcgagtggcaacaggatct
tacagcaatttgttccgtgtgtttggttgtgccccgggaagttctgaggcaacaactttg
gaagccagcaaaaatcccatgaggagacaagttcagacaccttcaaggccttccagatcc
ctaagcagtataacacgagttgtaagacggggagctgaaagcccaggggttgatgcaaat
ggaaattcgtttgatttcacaacaaagttgctgcatctagcatggcacccaactgaaaat
tcaattgcttgtgctgctgcaaacagcttgtacatgtactatgcatga
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