KEGG   Manihot esculenta (cassava): 110626418
Entry
110626418         CDS       T05761                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03013  Nucleocytoplasmic transport
mesc03015  mRNA surveillance pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110626418
  09122 Translation
   03013 Nucleocytoplasmic transport
    110626418
   03015 mRNA surveillance pathway
    110626418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110626418
   03041 Spliceosome [BR:mesc03041]
    110626418
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110626418
    TREX complex
     110626418
Spliceosome [BR:mesc03041]
 Complex C
  Other components
   EJC/TREX
    110626418
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110626418
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz RRM_3
Other DBs
NCBI-GeneID: 110626418
NCBI-ProteinID: XP_021627992
LinkDB
Position
11:complement(29742114..29744876)
AA seq 239 aa
MSSALDMSLDDIIKNNKKSGSGNARGRGRPSGPGPARRLANRGANRAAPYTASKAPETTW
QHDMFTDQGMAYGQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDR
SGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPPANNVSFGNS
NGVPRGGQGRGGTTGRPRGGGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN
NT seq 720 nt   +upstreamnt  +downstreamnt
atgtctagcgctttggatatgtctctcgatgatatcatcaagaacaataaaaagtccgga
tccggtaacgcccgaggccgcggccggccttccggacctggacctgctcgccgtttggcc
aaccgtggcgctaatcgagctgcgccgtataccgccagtaaggcgcctgaaacgacgtgg
cagcacgacatgtttacggatcagggtatggcgtacgggcaagcaggccgggcttccgct
atagagaccggaacgaagctttacatttctaatctagattatggtgtctcaaatgaagat
attaaggaattgttttcggaagttggtgatttgaagcggtactcaatccattatgatagg
agtgggagatcgaagggaacagcagaagtagtcttctctcggcgaacagatgccttggct
gctgttaagagatataacaatgttcagcttgatgggaaaccgatgaagatagagattgtg
ggaacaaatattgctactcctgctgcacctcctgctaataacgtttcttttggaaattca
aatggagttcctagagggggacaaggaagaggtggcaccactggacggccacgcggtggt
ggtggccgtggatttggaaggggtcgtggacgtggaaggggtcgtggtgagaaagtatct
gcagaagatcttgatgctgatctggagaagtatcattcagaagcaatgcagacgaattaa

DBGET integrated database retrieval system