| Entry |
|
| Name |
(RefSeq) ABC transporter C family member 13 isoform X1
|
| KO |
| K05674 | ATP-binding cassette, subfamily C (CFTR/MRP), member 10 |
|
| Organism |
mesc Manihot esculenta (cassava)
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:mesc00001]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110626423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:mesc02000]
110626423
Transporters [BR:mesc02000]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
110626423
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
11:complement(9503883..9533111)
|
| AA seq |
1461 aa
MELKNLICPNSPFVWDGNKFSECFNNLVLGFGANVLTILMISILAITLRNARGSHRLNFT
EKVVFHFLPAFGACVSFADTIFLLKKELYGDFIVYHEWLFKGSQLILWMSITISVKWAGY
RGIFCKCLICFWWIMKVLLEILHLHRTFSSLEVLECLTESSVVLLDIMFGLSINIIRIKQ
AYSKGSSMEDPLLSIDMDIEGGCPQDSGHAWSSWDLMTFKSITSVMKRGVRKQLDFEDLL
LLPNDMEPSTCHDRLLSCWGAQQSSSNPFLFKAICCAYGWPYFSIGLLKMLNDCIGFVGP
LLLNKLIRFLQQGSGHWNGYVLALSLGLTSILKSFLDTQYTFHLAKLKLKLRSGIMTLIY
QKCLCVNLAERSKFSEGEIQTFMSVDADRTVNLCNSFHDMWSLPLQIGLALYLLYTQVKF
AFLSGLAITILLIPVNKWISELIASATEKMMKQKDERIRRTGEILAHIRTLKMYGWERLF
SSWLMDTRSSELKHLATRKYLDAWCVFFWATTPTLFSLFTFGLFTLMGHQLEAATVFTCV
ALFNNLISPLNSFPWVINGLIDAFISTRRLSRFLCCQEYKHELNQRAESPSVFSNHQSDI
ISEDMAVIMHDTCCSWSSSNEQQQNLVLNHVTLCVPKGSFIAIIGEVGSGKSSLLSAILG
EMCLIHGSVHSNGSLAYVPQVPWIFSGTVRDNILFGKNYESKRYSDTLKACALDVDISLM
NGGDMAYIGEKGVNLSGGQRARLALARAIYQGSDVNMLDDVLSAVDAEVARFILHNAILG
PLMDQKTRVLCTHNVQAISSADMIVVLDKGHVKWVGSSADLSVSSYSAMSPHNEFDISPN
VQEQELRISTSIEGRKSYTLEKEFIHTSEEAQEIVEVELRKEGKVELAVYKNYAAFSGWF
ITVVICLSAILMQASRNGNDLWLSYWVDATGSSQADYSTSFYLVVLCIFCIANSFLTLVR
AFSFAFGGLRAAIQVHNTLLNKIIDAPVQFFDQTPAGRILNRFSSDLYTIDDSLPFILNI
LLANFVGLLGIAIVLLYVQVLFLLLLLPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYA
TFTETLDGSSTIRAFKSEDSFLVKFKELVALYQRTSYSEIIASLWLSLRLQLLAAFIMSF
VAMMAVVGSRGYLPISFGTPGLVGLALSYASPIVSLLGSFLTSFTETEKEMVSVERALQY
MDIPQEELRGSQPLKLDWPLQGLIQFQNVTMRYMASLPPALDGVTFTILGGTQVGIVGRT
GAGKSSVLNALFRLTPICSGCILVDGLNITDVPVRDLRAHFSVVPQSPFLFEGSLRDNLD
PLQMSNDLEIWNILEKCHVKEEVKMVGGLDVHIKQSGSSFSVGQRQLLCLARALLKSSKV
LCLDECTANVDTQTASVIQNAISTECKGMTVITIAHRISTVMNMDNILVLDRGHVIEQGN
PQVLLQDEFSRFSRFAKASTM |
| NT seq |
4386 nt +upstreamnt +downstreamnt
atggaattgaagaatctcatttgccctaattctccatttgtatgggatggaaataaattc
tcagaatgttttaataacttagttctaggatttggtgcaaatgtattgactattcttatg
atttcaatacttgcaattactctgaggaacgccagaggaagccacaggttgaacttcaca
gaaaaggttgtgtttcattttctacctgcatttggagcatgtgtctcatttgcggacaca
atttttcttttgaagaaagaactttatggagactttattgtatatcatgaatggcttttc
aaaggttctcaactgatactctggatgagtatcacaatttctgtaaaatgggctggttac
cgaggcatattttgcaaatgtctcatttgtttctggtggatcatgaaagtgctactggaa
atccttcatctgcacagaacattttcttcattggaggttttggaatgtctgacagaaagt
tcagttgtcttgttggatatcatgtttggtttatccatcaatatcatcaggataaaacag
gcatattctaagggaagttcaatggaagatccgcttctttctattgatatggatatcgag
ggaggttgtcctcaagattctggacatgcatggagcagttgggatctcatgacgttcaaa
tctatcacctctgttatgaagcgtggtgtcagaaagcagcttgactttgaagatttgctt
ttgctacctaatgacatggaaccctcaacctgtcatgatagattgttaagctgctgggga
gctcagcagagtagctctaaccctttcttgtttaaagcaatctgttgcgcatatgggtgg
ccatatttttctattggtttattaaagatgttgaatgattgcattggttttgtgggacca
ctgcttctcaataaactcattcggtttcttcaacaaggttctggacattggaatggctat
gttctggcattatccttgggccttacttctatcctgaaatctttcttagatacacaatat
acatttcatcttgcaaagttgaagctaaagctacgatctggtattatgactctaatttat
caaaagtgcctatgtgttaatctagcagagagatccaaattttctgagggggaaatacag
acatttatgtctgtagatgctgatcgaactgtcaacttgtgtaacagtttccatgatatg
tggagcttgcctttacaaattggtctagccttgtacctcttgtatacacaagtcaaattt
gcttttctttctggattggcaatcaccatcttactgataccagtgaataaatggatttct
gaattgattgctagtgccacggagaaaatgatgaagcagaaagatgagaggattagaagg
acaggagaaattttggctcatattcgcactttaaagatgtatggttgggagcgtcttttc
tctagttggctgatggacacaagatcctcagaactgaaacacttagctacgaggaaatat
ttggatgcatggtgcgttttcttttgggctacaacaccaactctcttctctttgttcact
tttggcctttttactttgatgggacatcagcttgaggctgctacggtattcacttgtgtt
gctttgtttaataatctaatatctcctcttaattcattcccgtgggtcatcaatggattg
attgatgcctttatatcaaccaggcggttgagcaggttcctctgctgtcaagagtacaaa
catgaacttaatcagagagctgaatctccttcagttttctcaaatcaccagtctgacatt
atctctgaagacatggctgttataatgcatgatacatgttgttcttggtcaagcagcaat
gaacagcaacagaatttggtgttaaatcatgtgactctctgtgttccaaaggggtcattc
attgcgataattggagaggttggttcaggtaaatcatcattattgagtgcaattttgggg
gaaatgtgcctcatccatggatcagttcattcaaatggatctctagcatatgtaccacag
gttccatggattttttctggaacagtacgtgacaatattttatttgggaagaattatgaa
tcaaaaagatattcagatactttgaaggcttgtgcactggatgttgacatttcattaatg
aatggaggggatatggcttatattggagaaaaaggagtcaacttatctggtggacagaga
gctcgtcttgctttggcaagggccatttatcaaggatcagatgtaaatatgcttgatgat
gtcctcagtgcagttgatgcagaagttgcaaggtttattttacacaatgctattttaggc
cctcttatggatcaaaagactcgtgttctttgtacccataatgtccaggcaatatcttcc
gctgacatgattgttgtactggacaaaggacatgtgaaatgggtgggaagttcagctgac
ttgtcagtatcatcatactcagcaatgtctccacacaatgaatttgatatatcaccaaat
gttcaagaacaagagctccgcataagcacttctattgaaggcagaaaaagttacactctg
gagaaagaattcatacacacttcagaggaagcacaagagattgttgaagttgagctgagg
aaggaaggcaaagttgaacttgctgtatacaagaattatgcagcattttctggctggttc
atcacagttgtaatatgcctttcagctattttaatgcaagcttctcgcaatggaaatgat
ctatggctgtcatactgggtcgatgcaacaggaagcagtcaggcagactactccacatcc
ttttatctggttgttctctgcatcttttgtattgcaaattcgtttctgacactggttagg
gcattttcatttgcatttggtggcttacgtgctgcaattcaggtgcacaatactttgctc
aataagataattgatgcacctgtgcagttctttgatcaaacacctgctggaagaatactt
aacaggttctcttccgatctctatacaatagatgattctcttcctttcattctcaatatt
ctcctagccaattttgttggcctgttgggaatagctatagtattgttgtatgtgcaggtt
ctcttcttgcttctattgttgccattttggtttatttacagcaagctgcagttcttctac
aggtcaacatcgagggaactgcggaggctggacagtgtttctcgttctcctatatatgca
acgttcacagagacacttgatggatcatccactataagggcatttaagtctgaggacagt
tttttggtcaaatttaaagaacttgtggccttgtatcaacggacttcttactcggagata
atagcaagtttgtggctctctctgcgtctccagttgttagcagcatttatcatgtcattt
gttgccatgatggccgttgttggatcccgtggctatttgccaattagttttggtacccct
gggctggtaggtttggctctctcatatgcatctccaatagtgtcactgttaggaagtttt
ttaacaagttttactgaaacagaaaaggaaatggtttctgttgagagagctcttcagtat
atggacattccccaagaagagctcaggggatcccaacctctgaaacttgattggccattg
caaggattgatccagtttcagaatgttacaatgagatacatggcatccttgccgcctgcg
ctagatggtgttacttttaccattctgggagggacacaggttggaattgttggaagaaca
ggagctggaaaatccagtgtcttgaatgctctctttcgcctcactccaatatgtagtgga
tgtattttagttgatggccttaacataactgatgttcctgttagagatctccgtgcacac
ttttctgttgttccccagagtccattcctatttgaaggatcactaagggataatctagat
ccactccagatgagtaacgacctggaaatctggaatattctggagaaatgtcatgtcaag
gaggaggtcaaaatggttggcggactggatgttcacataaagcagtccggatcatcattt
tccgttgggcaaaggcagcttctgtgtcttgcacgtgctcttctcaagtcttccaaggta
ctttgtttggacgaatgcacagctaacgtggacactcaaacagcttcagtaatacagaat
gcaatatctactgaatgcaaaggcatgacggtgatcacaattgctcatcgtatttccact
gttatgaatatggacaatatccttgttcttgaccgtgggcatgtgattgagcaaggtaac
ccgcaagttcttctacaagatgagttctccagattttcaagattcgctaaagcatctacc
atgtaa |