Manihot esculenta (cassava): 110626433
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Entry
110626433 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110626433
KO
K15198
transcription factor TFIIIB component B''
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110626433
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
110626433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110626433
NCBI-ProteinID:
XP_043817671
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Position
11:complement(13190453..13206962)
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AA seq
1165 aa
AA seq
DB search
MDSDLDSFDDILLEPAVAHARAAGKFQPRAKPRARKITSTSLPSVLPSNTREKSDSSFPT
TLDTTKPVQSVNPLDDRLISPVDSSLVLPSIVLGSEELLENNKNNLKCEPLNSSTQTVGR
REDLASPDSLPSEFVVTDSSNNGYSNFLFIEAGSSRLDLDPVDVVVPDTTSSKEVQNFAS
KTLKRSDDSNDHFIAIIPTSSDTAESLHSVDVTGNGSKVPVSLSMTTLDVAGEPWKDNDR
LSPHEKGSSVTSNLSPARAENAGSVAASLDGNGELNSSLLKSVEDVDSLGFDLDQPDIMF
PECHASDSRAGKKFQPKVRSHRRKEISGSSMEQPATVAAVNSHTTQPVESVLTMDKPVDP
VCPSSPNLDNESNEPSKENEVLLPHDNNLELVSPSSKEFMPKGDMSSKEAYLAGLDSNFG
QKPSGVADSPIEVNSLGLDLDPFADIVLPPAISNARAGGKFQPRGKARPRKVTSESNSFA
VSGATVEGPASVVSTVSDNLQSAKFIDVGDGRLMDSVYSTLTTMKSMESKEALRNDDCTN
SGVLLFKVDRSSGLENSSHLVASDALHIGDIDRDPHSGLGKSIGENADIFSGLEYIHDFV
TQSPRTEIPLPASSDGTEEHSRFPAQISVNSSAPGACNEATENVVTCNEAAVEIDNGKPQ
SDFQEPGSFPDFESPGILSESAIALECCTRNTQPKSMVQNGKEIPSTSILPDASPPNTQI
DPSESVYIDVGSIPTFPSEDVLDYSSISFGNFIPADPTRSEFPVNEERTNLAETSCSSDL
NILHHEDVSTVPAKESSKDRKRKSSSASYLAQNESVKSARQLRKRTIASQVVDGPEDEAQ
DSDGFPSEHRNSSIADGDIDYDYRVDEDNDNEDKVENTSSSRRASKKSKKPMAEQEKKPV
SRRKRKNDAPEQPNQQSRKKFSHSTRRKSRLKDLLSIPEDEIDYQKMPFKDIILLAGYKE
DLAIKEAKASKNSTKKSSTNSLHGEEEDDTVTSEQDGGVADDQSNSLFNCHSFMDKTPTA
RWSKQDTELFYEGIRQFGTDLSMIQQLFPGRTRHQIKLKYKKEERQHPLRLSEALSNRAK
DHSYFEKVMEQLQQVAAQEERESNRGNSVSLTDDEEAQLNPETNEEVAKSDEQDEDVTVD
QDGDPLKYDEDDDDFDIWGSYKSEY
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatttggactcctttgatgatatacttcttgaaccagctgttgcccatgct
agggctgctgggaagtttcaaccaagggctaagccacgagcaaggaagataacatccaca
tcacttccttctgtgcttccaagcaataccagggaaaagtctgattcatcattcccaact
accttggacactacaaaacctgttcagtctgttaatccactggatgatagattgataagt
ccagttgattcttctttggttttaccatcgatagtacttgggagtgaagaactcttggaa
aacaataaaaataacctgaaatgtgaaccattgaactcttcaacccaaactgttggaaga
agagaggatctagcttctccagactctctgccttcagagtttgtggtgactgatagcagc
aacaatggatattctaacttcttgttcatagaggcaggttcctctaggcttgatttggat
cctgttgatgtcgttgttcctgatactacttcaagtaaagaggtacaaaattttgcctca
aaaactttgaagcgttcagatgattcaaatgaccatttcattgcaataattcccactagc
tctgatacagcagaatctcttcattctgtagatgttactggtaatggatctaaggtacca
gtatctttgtccatgactaccttggatgtggctggagaaccttggaaagacaatgatcgg
ttgtccccgcatgaaaaggggagctcggtaacatcaaacctctcgcctgcaagggcagaa
aatgctggttcagtggctgcatcattggatggtaatggtgaattgaattctagcctcttg
aaatcagtagaagatgtagattccttggggtttgatttggatcaaccagatattatgttt
cctgaatgccatgcaagtgactctagggctggtaaaaaatttcaaccgaaggttagatcc
catcgcagaaaggaaatatctggatcatcaatggaacaacctgctactgttgccgctgtt
aattctcatacaacacaacctgtagagtctgttcttaccatggataaacctgtggaccca
gtttgtccatcctcacctaacctggacaatgagagtaacgagccatcaaaagaaaatgaa
gttttacttcctcatgacaacaatttggaattagtcagtccctcatcaaaagaattcatg
cccaaaggggatatgagctccaaagaagcttatcttgcagggttagattccaactttggt
caaaagccttctggtgttgcagattctccaatagaggtcaactcgttagggcttgatttg
gacccttttgctgatattgttctcccaccagctataagcaatgcgagggctggtggaaaa
tttcaacctagagggaaggcccggcctcgaaaggtaacatctgagtcaaattcttttgct
gtatccggtgctacggtggaagggcctgctagtgttgtatccactgtctcagataaccta
cagtctgctaaatttattgatgttggagatggtagattgatggattcagtttattcaact
ttaactaccatgaaaagcatggaaagcaaagaggcattgagaaatgatgactgcacaaat
tctggagttctattgttcaaggttgacagaagttcaggattagagaattcttcccattta
gttgcctctgatgctttgcatataggtgatattgatagagatccacattctgggttggga
aaatcaattggtgaaaatgcagacatattttcagggctggaatatattcatgattttgtt
acccaatccccgaggacagaaattccacttcctgcttcaagtgatggaacagaggaacat
tctagatttccagctcaaatttccgttaattcttcagcacctggtgcatgcaatgaggca
actgaaaatgttgtgacttgtaatgaagcggctgttgagattgataatgggaagccacag
tcagattttcaggaaccagggtccttccctgactttgaaagtccaggcattttgtccgag
tctgccattgcattggaatgctgtaccaggaacacccagccaaaatccatggtacaaaat
ggcaaagagatacctagtactagcattcttccagatgcatctccaccaaacactcagatt
gatccttctgaatctgtgtacattgatgtaggctccattcctaccttcccatcggaggat
gttcttgattattcatccattagctttggcaattttattcctgcggaccctactaggtct
gagtttccagtgaatgaagaacgaacaaacctggcagaaacttcttgctccagtgactta
aatattttgcaccacgaagatgtatctacagtgcctgcaaaggagagttctaaggatagg
aaaagaaagtcttcttcagcatcatatcttgctcagaatgaaagtgtcaaatcagcaagg
caactgaggaaaaggaccattgcttcacaagttgttgatgggccagaggatgaagctcag
gatagtgatggcttcccttctgaacatcgtaatagttctatagcagacggtgatattgat
tatgactacagagtggatgaagataacgataatgaagataaagtggaaaatacatctagc
agtagaagagcttcaaaaaagtcaaaaaaacctatggctgaacaggaaaagaaacctgtt
agtagacgtaagaggaaaaatgatgcaccggaacagccaaatcaacagtcacgcaagaag
ttttctcattccactcgacggaaaagcagattaaaagatttgcttagcataccagaggat
gaaattgattaccagaagatgcctttcaaagatattattttgcttgctgggtacaaggag
gatttagctattaaagaggcaaaagcttctaagaattcaacaaagaaaagcagtacaaat
tctttacatggggaagaagaagatgatactgtcacttcagagcaagatggaggcgttgct
gatgatcaatcaaattccttgtttaattgccattctttcatggataaaacaccaactgca
agatggtcaaaacaagacacagagttgttttatgagggaattcggcaatttgggactgat
ctgtcaatgatacaacaacttttccccgggcgaacgcgtcatcaaatcaagttgaaatat
aagaaggaggagcgtcaacatccattaaggctctctgaagccctgagcaatcgtgctaaa
gatcattcgtattttgaaaaagtgatggagcagctgcaacaagttgctgcccaggaagaa
cgggaatctaacaggggcaactctgtcagtttgactgacgatgaggaggcccagttgaat
cctgaaactaatgaagaagtggcaaaatctgatgagcaggatgaagatgtaacagttgat
caggatggagaccctttgaagtatgatgaggatgatgatgactttgatatatggggctca
tataagagtgaatattga
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