Manihot esculenta (cassava): 110626451
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Entry
110626451 CDS
T05761
Name
(RefSeq) DNA repair protein RadA isoform X1
KO
K04485
DNA repair protein RadA/Sms
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110626451
DNA repair and recombination proteins [BR:
mesc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
110626451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
Lon_C
AAA
AAA_22
NACHT
AAA_16
SLFN-g3_helicase
NTPase_1
nSTAND3
AAA_14
AAA_19
POTRA_3
AAA_5
Motif
Other DBs
NCBI-GeneID:
110626451
NCBI-ProteinID:
XP_021628051
LinkDB
All DBs
Position
11:3094544..3104839
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AA seq
691 aa
AA seq
DB search
MQILDMKAVRSFCTHSQFFFFNPTKTLRAFSFHPRQFHPASRRFCAGESALSSQSSITNS
DSGDKRNGNNSESARQVWSIYGSVSSNTNKSDEQELEPRLSNFPTEVRDTHVERTYGSAR
KGNLSDKDNAPVGVESSDEEIDKLSKENDYSGLKTENLSNRDKIRKGVVRYSNDNGDFLN
ERRYGGLKKADLLKEVGPGKIVGSRKKGKTKITYVCENCGYEDGQWWGICRECRLAGTMK
QFIERDVESGTKVTGMEVSENAVRSWLPQKVGEAHPLKLKDINQRMDQLNWRIPLPGLFG
SEVARVLGGGLVPGSLILVGGDPGVGKSTLLLQIAAIIAEGQDVGKQTPVVYVSGEESIE
QIVNRADRIRIGVEEIFLYSSTDIEDILAKIQPLSPRALIIDSIQTVYIQGVTGSAGGLS
QVKECTSALLRFAKKTKIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYLEGEKHSTHRLLR
PVKNRFGSTDELGVFEMSQSGLEAVSNPSEIFLSEQYLGSEILVGLAVAVIMDGSRSFLL
EIQALCATGSSVSRHVNGIQASRADMIISVLKKQAGLMLQENSIFLNVVSGVTLSETAGD
LAIAAAICSSFLEFPIPNNVAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKMCIVPKSAE
KYLSTVGFEGLKIIGCSNLRQVIDTVFTRQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccttgacatgaaagccgtaagatcattctgcacacacagccagttcttcttc
tttaaccccaccaaaaccctcagggctttctccttccatccccgtcaattccaccctgcc
tcccgtcgtttttgcgccggagagtccgctctcagctcccaatcctccataactaactcc
gattctggcgacaagcggaatggcaataatagtgaaagtgcccgtcaagtttggagtatt
tatggttcagtctcatcgaacacaaataagagtgatgagcaagaattggagccgagattg
tcaaattttccaacggaagttagggatacccatgtagagaggacttatgggagcgcaagg
aagggaaatttgagtgacaaggacaatgctcctgtgggcgtggagagttctgacgaagaa
atagacaagttatccaaggaaaacgattatagtggtttgaagacagagaatttgagtaat
agagacaaaatccggaagggagtagtgcgttatagtaatgataatggagattttctgaac
gaaaggaggtatggaggtttgaagaaggccgatttgctcaaggaagtgggacctgggaag
atagttgggagtagaaagaagggaaagactaaaattacttatgtttgcgagaactgcggg
tatgaagatggccaatggtggggaatctgtcgagaatgtcgcctggcaggaacgatgaag
cagtttatagaaagggatgttgagagtggaactaaagtaactgggatggaggtttctgaa
aatgcagtgcggtcttggctaccacagaaggttggtgaggcacatccattgaagttgaaa
gatattaaccagaggatggatcaattgaattggaggattcctttgcctggactctttgga
agtgaagttgctagggtgcttggtggcggtcttgttccaggttctttgattttggttggt
ggtgatcctggtgttggcaagagcactctgttattgcagattgctgcaataattgctgaa
ggacaagatgtaggtaaacaaactccagttgtatatgtctctggagaagagagtattgag
caaattgttaacagggctgatcgcataaggatcggagtggaggaaatattcttgtattca
agtactgatattgaggacatattagcgaaaattcagcctctatctccccgtgctctaatt
attgattcaattcaaacagtttatatacaaggagttactggaagtgctggaggattatct
caggttaaggaatgcacatcagctttgctgcgatttgccaagaagacaaaaataccagtt
cttttgattggacatgtgaccaaatccggagatatagcagggccccgtgtcttggagcac
atcgttgatgttgttttatatttggaaggagagaagcactcaactcatcgcttacttcga
cctgtgaagaatcgctttggatccactgatgagcttggagtatttgagatgtcacaatca
ggtctggaagctgtttcaaatccaagtgagatattcttaagtgagcagtatttgggttca
gagattttagttgggctagctgttgcggtaataatggatggatctcgaagtttccttctt
gaaattcaggcattgtgtgccactggttcatcagtttcaaggcatgttaatgggatacaa
gctagcagagctgacatgattatatcggttcttaagaagcaagctggtttaatgctccaa
gagaatagtatctttttaaatgttgttagcggggtgacattgagtgagactgctggagat
cttgcaatagcagctgcaatttgcagtagtttcttggagttccctattcccaataacgtt
gcattcattggagaaattggccttggtggtgagctacgcacggtaccaagaatggagaaa
agagtaaatacagttgccaagctgggatataaaatgtgtattgttcccaagtcagctgaa
aaatatctatcaactgtaggttttgaggggctaaaaatcataggctgttctaatctgaga
caagtcattgacacggttttcacaagacagaaatga
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