Manihot esculenta (cassava): 110626464
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Entry
110626464 CDS
T05761
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110626464
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110626464
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
110626464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
Motif
Other DBs
NCBI-GeneID:
110626464
NCBI-ProteinID:
XP_021628071
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All DBs
Position
11:4819152..4824677
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AA seq
914 aa
AA seq
DB search
MSMKEMENEENEPKFPGFPYKPYLIQMDFMKALYRSLDKGGVSMLESPTGTGKTLSIICS
SLQWVYDQRQKQKDRAKAESDRNQSDHGEIGSDDEPDWMRNFVANTEVRKQEKKVKKKFG
LGKSCERKNQDPEVIPRVLEEEDCHLKKDGVDLNDEEFLLDEYESDDEVSIGSGKSKRKV
GGCLASSSSDEEGENDASDEEEEKDLKIYFCSRTHSQLSQFIKELRKTRFTNEITVVCLG
SRKNFCINEDVLKLGNVTRINERCLELQKSRKNVVSKIKNIGANGRTRRTKASSGCPMLR
KHKLQRQYRDEVSQLGALDIEDLVQLGRGMGTCPYYGSRSLVPVADLVVLPYQSLLSKSS
REFLGLNLKKSIVIIDEAHNLADSLISMHDAKITLSELDHVHSLIEKYLARFYNLLGPGN
RRYIQTLMVVTRALRQTLCSEMDLSRGNTFQVEEKAAEVKPVLDISMAINDFLFSLNIDN
INLVKLLQYIKESNFIHKVSNYGEKVTSLQKDPVLNGSGACGEERSSLSSFRALVDMLVS
LTNTDGDGRIIISKSRSACSGRQGGFLKYVMLTGEKIFSEIVNQAHAIILAGGTLQPVEE
TRERLFPWLPQSQLHFFSCSHIVPPESILPIAVSRGPCGQLFDFSYSSRSSLKMIEELGL
LLCNLVAVVPEGIVVFFSSFEYEGKVYDAWKTSGILERIMKRKRIFREPRRNPDVERVLK
EYKETIDGLSTHAKDVAPHNGAILLAVVGGKISEGINFSDGMGRCIVMVGVPYPSPSDVE
LIERVKYIESLGEPNPVETRKTSVSDEYFNGDVQAAFSILRSCKRRGQEYYENLCMKAVN
QSIGRAIRHIKDYAAILLVDTRYASDSSRRSFSHQTNKLPQWIKDRLVPSTNNYGEVHRL
LHQFFKFNKKRELQ
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaagagatggaaaacgaagaaaatgagccaaaatttccaggatttccatac
aagccctacttgatccagatggatttcatgaaggcactttatcgatctttggataaaggt
ggcgtttccatgcttgaaagccctacagggactgggaaaactctgagtatcatatgcagt
tctttgcaatgggtttatgatcagaggcaaaagcagaaggacagagcaaaagctgaatct
gataggaatcaaagtgatcatggtgaaattggctcagatgatgaacctgattggatgaga
aactttgttgctaacacagaagtccgaaaacaggagaagaaggtcaagaagaaatttggg
ttaggaaaatcatgcgagagaaagaatcaggatccagaagttattccgcgtgtattggaa
gaggaggattgtcatttgaaaaaagatggggtggatttgaatgatgaggagtttttgttg
gatgaatatgaaagtgatgatgaagttagtattggcagtgggaaatcaaagaggaaggtt
ggagggtgtttagctagttcgtcgagtgatgaggaaggggaaaatgatgcgtctgatgag
gaggaggaaaaggatttgaagatttatttttgcagtcggacgcattcgcagctctcccag
ttcattaaggagttgagaaagacgagatttaccaatgaaataacagttgtttgtttggga
tctaggaagaatttctgcattaatgaagatgttctaaaacttggaaatgtcactcgcatt
aatgaacgatgcttggagcttcaaaagagcagaaaaaatgtagtctccaaaattaagaat
ataggtgcaaatggaagaacacgtcgaactaaggcttcttctggatgcccaatgcttaga
aaacataagctgcagaggcaatatagagatgaggtttctcagctaggagcactggacatt
gaagatcttgttcaacttggaagaggcatgggaacttgtccatattatggctcccgaagt
ttggtcccggtagctgatcttgtggttctcccatatcaatctcttctatcaaaatcatca
cgtgaatttcttggactgaacttgaagaaaagcattgttataatagacgaggcacataat
ctcgctgactccttgattagcatgcatgatgcaaaaattacactttcagagttggatcat
gtgcattcactcatagaaaagtaccttgcaagattttacaatctcttgggacctggcaat
cgaagatatatccaaactctgatggttgttactcgagctttacgccagactctatgtagt
gaaatggatttgagccgtggaaatactttccaagttgaagaaaaagcagctgaagtgaag
cctgtccttgatatttctatggccattaatgattttctattttccctcaatatagacaac
attaatttggtcaaattgctccagtatataaaagaaagcaactttatccacaaggtaagt
aattatggagaaaaagtgactagcttgcagaaagacccagttctgaatggtagtggagca
tgtggtgaggagcggagctctctgtctagtttccgggccttagttgatatgttggtatca
ctaaccaatactgatggtgatggacgcataataatatcaaaatcaaggtcagcatgctct
ggaagacaaggaggattcctcaagtacgttatgctcactggggagaagattttttcagag
attgtgaatcaagcacatgcaattatactggcaggaggaacccttcaacctgtagaagag
acaagggagagactcttcccttggttaccacaaagtcagcttcatttcttttcatgtagt
catattgtccctcctgagagtattttgccgattgcagtttcccgtggaccttgtggtcaa
ttgtttgatttcagctacagctctagaagctcactaaagatgatagaggagctaggtctt
ttgctttgcaatctagtggctgttgttcctgaaggaattgttgtgttcttctcctcattt
gaatatgaaggaaaggtctatgatgcatggaagacatcaggcattcttgaaaggattatg
aaaagaaagcgcatcttcagagagcctagaagaaatcctgatgtggaacgcgttctcaag
gaatacaaggaaacaattgatggattatctactcacgcaaaagatgtagcacctcacaat
ggtgcaatactcctagctgtagttggtggaaagatatcggaaggcattaacttcagtgat
gggatgggtcgatgcatagttatggttggagtgccttacccaagcccatctgacgttgag
ttgatagagagggtcaagtatatcgaaagtttgggagaaccaaatcctgtggaaacccgc
aaaacttcagtcagtgatgaatatttcaatggggatgttcaggctgcattcagcatccta
aggagttgcaagcgaagaggacaagaatattatgaaaatctctgcatgaaagctgtaaat
caatcaattggtagagcaatacggcacataaaggattatgcagcaattttgttggttgac
acgcgttatgcatctgattcctcaagaagaagcttctctcatcaaacgaacaagcttcca
cagtggattaaagatcgtcttgttccctcaaccaataactatggtgaagtccacaggcta
ctgcatcagttttttaaattcaacaagaagagagaattacaataa
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