Manihot esculenta (cassava): 110626501
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Entry
110626501 CDS
T05761
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110626501
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
110626501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
110626501
NCBI-ProteinID:
XP_021628112
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Position
11:13448385..13457446
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AA seq
639 aa
AA seq
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MGVELAHQFNVEVQEMEDVNFTDSELVYHVRDALISVQSGDSDSYHQLVGVMHHSQRLAP
DEVALLVTSLKALSGAVSYIDSIHHDSLLNSIFGMSMWNYGSDVMDALLELIISLAASNG
KYVDSCLDMLVGNFMPPMYFMEALKQPRGQTKKEQVLSRVHTALEDIAALVPMAALRLSS
IVVHRMPPTFKKSLEKNRLKYRTEIFVENMLRLESGAIREFIGSRMIMAVVDMLIELDVS
IGWDDILRDDSSKGIFTIELEDVDDIASDDDDDNEENDELPATLSHKRLGKNIVADLLDS
LMVKIFEHLEFCANNKRLSEVFETLLDSFMLTILNTYKSKFAQFVMFYACALDPENCGEK
FAKMLVDRFVYGDNPLTRMSAVAYLASYLARAKFLSVAFVSTTLKRLVDWCLEYCKIQDG
EINPKAHRVFYSGCQAIMYVLCFCMRSIMDVPWLKSQLLLMPIEQILKHKLGPLKVCLPS
IVEEFLKQAKAAHLFTTSETFIFEDLLESDFSRDFGGLERLDMFFPFDPCLLKKCDRNFI
RPNFVYWKNVKTTYASDDEEEDSSDEDINEDFVPMNGESFMEEVVAKSADEQLLDIDEFD
YAMNKMSITPKNGLNFRFGGDVTMQMPSRIRPSTSPESL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgaattagctcatcaattcaacgttgaggttcaggagatggaggatgttaat
ttcactgattctgagcttgtttatcatgtcagagatgctcttatttccgttcaatcggga
gatagtgacagttaccaccagcttgttggagtaatgcatcattcacaacgtcttgcccct
gatgaggtggcccttcttgtgactagcctaaaggcgctatctggggcagtttcttatata
gacagcattcaccacgactctctccttaactctatttttggaatgagcatgtggaactat
ggatctgatgtgatggatgcattgctagaattaattatttccttggctgcttcaaatgga
aaatatgttgattcatgcttggatatgcttgtgggaaattttatgccaccaatgtatttt
atggaagcactaaagcaacctcgtggtcaaacgaaaaaggaacaagttctttctcgggtg
catacagctctggaagatattgctgctttggtacctatggcagcattgagattgtcatca
atagttgtccataggatgccaccgacctttaagaagagtcttgagaagaatagactgaag
taccgaactgagatctttgtggagaatatgttgagattggagagtggtgcaattagggaa
tttattgggagcaggatgatcatggcagtggttgatatgttgatagagttggatgtgtct
attggttgggatgacattttacgagatgactcttctaaaggcatctttacaattgagcta
gaagatgtggatgatattgcctctgatgatgatgatgacaatgaagagaatgatgagctt
cctgcaactttgagtcacaagagattaggtaaaaacattgttgctgatttattggatagc
ttgatggtgaaaatatttgaacatctcgaattttgtgcaaataacaagcgtttgagtgag
gtatttgaaactctcttggattcatttatgcttaccatcttgaacacttacaagtcaaaa
tttgctcagtttgtcatgttctatgcttgtgcactggatcctgagaactgtggtgagaag
tttgccaaaatgcttgtggataggtttgtttatggtgataacccgcttaccaggatgagt
gctgtggcttatcttgctagttatttggctcgtgcaaagtttctctctgttgcctttgtt
tctaccacgttgaaaaggttggtcgactggtgtttggaatattgtaaaatccaggatggt
gaaataaacccaaaagcacatcgagttttctattctggatgccaggccatcatgtatgtc
ctttgcttttgtatgaggtcaataatggacgtcccttggctcaagtcacagcttcttctc
atgcctatagagcaaatcttgaaacataaattgggccccttgaaggtgtgcctgccatct
atagtagaagagtttcttaaacaggcaaaagctgctcatttgttcaccacatctgaaact
ttcatttttgaagatttgctggaatcagatttttccagggattttggtgggcttgaaaga
ctggatatgttcttcccattcgacccatgtttattgaaaaaatgtgacaggaacttcatt
cggccaaacttcgtgtactggaagaatgtgaaaactacttatgccagtgatgatgaagaa
gaagatagcagtgatgaagacattaatgaggattttgtccccatgaatggggagagtttt
atggaggaagtagtggcaaagagtgctgatgagcagctacttgatattgatgaatttgac
tatgcaatgaataaaatgtcaatcacacctaagaatggcttaaattttagatttggaggt
gatgtaacaatgcaaatgccctcaagaattagaccctctacgagtccagagtctttgtga
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