Manihot esculenta (cassava): 110626504
Help
Entry
110626504 CDS
T05761
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110626504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110626504
03036 Chromosome and associated proteins [BR:
mesc03036
]
110626504
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110626504
Coactivators
SAGA/TFTC/STAGA complex
110626504
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110626504
STAGA complex
110626504
TFTC complex
110626504
SAGA complex
110626504
SLIK complex
110626504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
FliD_N
Motif
Other DBs
NCBI-GeneID:
110626504
NCBI-ProteinID:
XP_021628118
LinkDB
All DBs
Position
11:complement(2208145..2214639)
Genome browser
AA seq
630 aa
AA seq
DB search
MAEAAASSPKPTPSPNPMDPSPPPPPPQPQSQSQPPPTALTNSNSNTTALTPPQSQPQAQ
AQAPTSSMSNQNQQIASPSLDRQISSPPLSSQQQQQPIGQQQQQQQSQQQLQQQNITAMS
NYQIPQSLQRSPSMSRLSQINQQQQQQNQYSGILRQQQQQQGLYAQVNFGGSGSIQQNLQ
NQQMSGTNLSRSALLGQSGHLPMLTGAGAGSVAAAAAAQLNLLASKAGLVQGSQFHPGNS
PGQPLQGMQAMGMMGSLNLTQQLRPNGALNYAQRQQLAQQNSLTSHQVPNLSRTFMNPQL
SSLAQNAQPAMMQNSLSQQQWLKQMPAISGPASPLRLQQQQRQSQVLLQQQLASSPQLLQ
NSMPLSQQQLSQLVHQQSSMGHQQLHQQQQQPQQQLQQQQQLLQQHQQPHQQLQQQLPSH
QSQQQQSPRMQGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKMHDLV
SQVDSQGKLDPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWHLT
IPGFSTEERNFQRKPNVQLSSDLHKKRLDMIRALRESSRSETNNNNNPKEIIRQGLGNPI
VTNHLIRPPSSEQLVSQSTSSQILQQITRF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccgcagcttcttcccctaaacccaccccttctccaaatccgatggaccca
tcaccaccaccgccacctcctcaaccacaatcacaatcacaaccaccgcctacggcgtta
acaaattcgaactccaacaccacagctcttacaccaccacaatcacaaccgcaagcacaa
gcacaagcaccaacatccagcatgtcaaatcaaaatcaacaaattgcatctccttctctt
gaccgacaaatttcatcgcctcctctttcctctcaacagcaacaacaaccgataggacag
cagcagcaacagcaacaatcgcagcagcaattgcaacaacagaatatcacagccatgtcg
aactatcaaattccacaatcccttcaaagatctccttccatgtctcgtttaagccaaatt
aaccaacagcaacagcagcagaatcagtacagtggcatcttgaggcagcagcagcaacaa
cagggcctgtatgcccaagtgaattttggtgggtcgggttcaattcagcagaatttgcag
aatcagcaaatgagtggcaccaacttgtctcggtcggcacttctcgggcagagcgggcat
cttcccatgctgaccggagcgggggcagggtctgtggcagcagcagcggctgctcagctg
aacttgttggcctcgaaagctggtttagtccaagggtctcaattccaccctggtaattct
ccggggcagcctttgcagggaatgcaagcaatgggaatgatgggatcactcaatttgacc
caacaactaaggcctaatggtgcgcttaattatgctcaaagacagcaattggcacaacaa
aattcactcacctctcatcaggttccaaacctttcaaggacatttatgaaccctcaactg
tctagtctggctcagaatgcacaaccagcaatgatgcaaaactctctgtcacagcagcaa
tggttgaagcaaatgccagcaatttcaggtcctgcctcaccactccgtcttcaacagcag
cagagacagtcgcaggttcttttgcagcagcagttggcttcatctcctcagttgctccag
aattcgatgccattaagtcagcaacaattatcccaactggtacatcagcagtcatcaatg
gggcaccaacaactgcatcagcaacagcagcaaccacaacagcagttgcaacaacaacag
cagctactacaacagcatcagcaaccacatcagcaattgcaacaacaattaccctcacat
cagtcgcagcaacagcaatctccgaggatgcaagggcccacaggccagaaatctcttagc
ttgacaggttcacaaccagatgcaacagcatctggtacgaccacaccaggggggagttcg
agccaaggaacagaagcaactaatcaactacttgggaagagaaagatgcatgacttggtt
tcacaggtagattcacagggaaagctagaccctgaagtcgaagatctccttttggagatt
gctgatgatttcattgattctgtgactacatttgcatgcagtttggcaaagcaccggaaa
tcttcaactttagaatccaaggatttattactacacttagagaagaactggcatctgaca
attccgggattttcgactgaagaaagaaactttcaaagaaaacctaatgtgcagttatcg
agtgatcttcacaagaagcgtcttgatatgattcgtgcattgagggagtcctcacgctca
gaaacaaataataataataatcctaaagagattatcagacaagggcttggcaaccccata
gttactaaccacctgataagaccaccaagttcagagcagctggtttcccagtcaactagt
tctcaaatactgcagcagatcacgcgattttaa
DBGET
integrated database retrieval system
