Manihot esculenta (cassava): 110626515
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Entry
110626515 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110626515 isoform X1
KO
K17925
sorting nexin-13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
110626515
Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110626515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
110626515
NCBI-ProteinID:
XP_021628148
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All DBs
Position
11:4806780..4815195
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AA seq
1148 aa
AA seq
DB search
MSTQRQVTVRDLVEEAKKRIVFLVICVVGLSYLMSLTSSSVWVNLPAAASLIILLRYFSL
DYEMRRKAIVYNNKHHSSNSFSQNIIPEHTRVLGKSDWRRKVNSPVVEDAIDHFTRHLVS
EWVTDLWYSRLTPDREGPEELVQIMNSVLGEFSNRMRNINLIDLLTRDLINLICAHLELF
RASQAKNEKLLSGLVSIEQRDKELRLVLADENRLHPALFSAEAEHKVLQHLMDGLISFTF
NPEDLKCSFFRYIVRELLACAVMRPVLNLASPRFINERIENLVISKTNKGVAAVQEVSQS
KPNGSSKIPSDQFSRFLDPTGTGVELVQLKTDHSKRGTGEPELDNVNGTRISKDPLLSVD
TRSSRAWSSLPLNSQIKDEGGLQRHHSGGEWGDVLDRFSRRKTAALAPENFENMWTKGRN
YQKKEGVKVIEQVPQNSSVNKPATADRSKMPKLKEKHGVAKLDSPPADNGQTHSNQSTVE
NPYHQMDQNLSNHSLYTSYHEDDEQCFMHLNENESGSVSPYTSEEEDPSSITGLDDPGTK
VWDRKTNRNLAVSPIHHPLENPGHHATRKTSRGQALYERLSGTESGRKRSRSSTQKLHVW
QEIERTSFLSGDGQDILSSKGHSKADESSDDSEVEGLDRANGGATACSSTPSASISENHS
SAVHSLKNSLMVDSFFKLRCEVLGANIVKSASRTFAVYSISVADVNNNSWSIKRRFRHFE
ELHRRLKEYAEYNLHLPPKHFLSTGLDMPVIQERCKLLDIYLKKLLQLPTISGSIEVWDF
LSVDSQTYFFSNSFSIIETLSVDLDDKPSEMSRKASHPTGPVSNSISTKRDQLGTDHKDS
SLQTKHNFVADGVKMSPKYTSHSPVKRPGKECGKSLEDSGSDSDTQKNVSVRNLGKIVEG
RQTDGLEQTSELIHDTASDPTLPTEWVPPNITAPILGLVDVIFQLQDGGWIRRKAFWVAK
QILQLGMGDALDDWLIEKIQLLRTGSVVASGIKRVEQILWPDGIFITKHPKRRPPSAPNS
SHSSPHGQQPMDASSPKLSSPLGHQPTEISSPRPSDDQLKYEADRRAKFVYELMIDNAPS
AIVGLVGRKEYEQCAKDLYFFLQSSVCLKQLAFDLLELLLLSAFPELDHVFRQLHEEKHR
FGDFNPNK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaaaggcaagtgacagtgcgagacctagtggaggaagcgaagaagaggatc
gtgtttttggttatttgcgttgttggattatcgtatctgatgtcattgacaagctcctca
gtttgggtcaacttgccagctgctgcctccttaataattctcctccgatatttctcccta
gattatgaaatgcggaggaaagctattgtatacaacaacaaacatcactcatcaaattca
ttttctcaaaacatcattcctgagcatactagagttcttggaaagtctgactggagaaga
aaagtgaattcccctgttgttgaggatgcaattgatcacttcactagacatttagtctct
gagtgggtgacggatctgtggtattctcgcctaactccagatagagaaggtccagaggaa
ctggtgcagataatgaatagcgttcttggggaattttcgaatcgcatgagaaatataaat
cttattgatctgttgactagggatcttattaatctcatctgtgcccacttggagcttttt
cgagctagtcaagcaaaaaatgaaaagcttctttctggattggtgtctattgaacagcga
gacaaggaactgcgacttgtcctggctgatgagaacagattgcaccctgctttattttct
gctgaagcagagcacaaggttttacagcatctgatggatggtctcatttcgttcacattc
aatccagaagatctaaagtgctcttttttccgttatatagtaagggaacttcttgcttgt
gcagtaatgcgacccgtactaaatttagctagtccaaggtttataaatgaaaggattgaa
aatttggtcatttctaagactaataaaggagttgctgcagtgcaagaggtgtctcaatcc
aaacccaatggatcttccaagatcccatctgatcaattttccaggtttctagatcccact
ggtactggcgttgaacttgtgcagttaaaaactgatcattccaaaaggggaacaggtgaa
cctgagttggataatgtgaatggaacacgtatctcaaaagatccattgctttctgttgat
actcgatcttcccgtgcatggagctcactgcctttgaattcccaaattaaggatgaagga
gggcttcagcggcaccattcaggaggagaatggggtgatgtgttggacagattttctcgt
agaaagactgcagcccttgcacctgaaaattttgaaaatatgtggacaaaaggaagaaac
taccaaaagaaagaaggcgtgaaggtaattgagcaagtcccacaaaattcttctgtgaat
aaaccagctacagcggatcgatcaaagatgcctaaactcaaggaaaagcatggggtggcc
aaacttgattcccctcctgcagataatggtcagactcattctaatcagtctacagtggag
aacccatatcatcaaatggatcagaacttgtcaaatcattctttatatacttcatatcat
gaagatgatgagcaatgcttcatgcatttgaatgagaatgaatctggcagtgttagtcct
tatacatctgaagaggaagatccaagcagtatcacaggccttgatgatcctggaactaaa
gtttgggatcgtaaaacaaatagaaatttggctgtttcccccattcatcatccacttgaa
aatcctggacaccatgctacaaggaagactagtagagggcaggctctttatgaaagatta
tctggaacagagtctggcaggaaaaggtcaagatcaagcactcagaagttgcatgtttgg
caagagattgagaggacaagcttcttgtctggggatggtcaggatatacttagttcaaaa
ggacattctaaagctgatgaatctagtgatgattctgaggttgaaggtttagatagggct
aatggtggggcaactgcttgttcatctacaccgtctgcttctatttcagagaatcatagt
tcagctgtccattccttgaaaaattcattgatggtggattctttttttaagttgagatgc
gaggttttgggtgcaaatattgtgaagagtgcttctagaacatttgctgtgtattctatt
tctgttgcagatgtaaataataatagttggtcaatcaaaagaaggtttcgacattttgag
gagttgcaccgccgtctaaaagagtatgcggagtataatcttcacttgccaccgaagcat
tttttgtcaacaggtttagacatgcctgtcattcaagaaaggtgtaaattgctcgatata
tatctcaagaagctcctgcaacttcctacaatttcgggatctattgaagtttgggacttt
cttagtgttgattctcagacatattttttctcaaactccttttccatcattgagacattg
tcagttgaccttgatgacaagccatctgaaatgagtagaaaggcctcacatcctacgggg
cctgttagcaattccatatctaccaagagggaccagttaggcacagaccacaaggattct
tcattacagacgaaacataattttgtcgcagatggggtaaagatgagtccaaaatacaca
tcccattctccggttaaaaggcctggtaaagaatgtggaaagtcattagaggattcaggc
agtgactcagatacccaaaaaaatgtgtctgttagaaacttggggaagattgtagaagga
agacagactgatggtttagagcagacatcagagttgattcatgatactgccagtgatcct
acccttcctacggagtgggtgccaccaaacataactgcccctatactaggcttggtagat
gtcattttccaactacaagatggtggatggatcaggaggaaagctttctgggtggcgaaa
cagattctacaactaggaatgggtgatgccttagatgattggttgatagagaaaatccag
cttctccgtactggttcagtggttgcttcagggatcaagcgggtggagcagatactttgg
cctgatgggatattcattacaaaacatcctaagaggcgacccccatccgctcccaactca
tctcatagctcacctcatggccagcaacccatggatgcatcttcacctaaactaagttca
cctctaggccatcaaccaacagaaatatcttcacctagaccaagtgatgaccaactaaaa
tatgaagcggatcggcgtgctaaatttgtatatgagctgatgatcgataatgcaccatct
gccattgtagggcttgttggtcggaaggaatatgaacaatgtgctaaggatctctatttt
tttcttcagtcatcagtctgcttgaagcaactggcttttgatcttcttgagctgctgctt
ttatctgcatttccagaattggatcatgtcttcaggcagttgcacgaagaaaagcataga
tttggtgattttaatccaaacaagtaa
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