Manihot esculenta (cassava): 110626631
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Entry
110626631 CDS
T05761
Name
(RefSeq) tRNase Z TRZ3, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110626631
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
110626631
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
110626631
Prokaryotic type
110626631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
110626631
NCBI-ProteinID:
XP_043818027
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Position
11:complement(3505757..3513656)
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AA seq
944 aa
AA seq
DB search
MPQISNLRFLLSPIKPSLPFPFSKPKPYSLFTVLCSSSSSRRHRTTPNHQSLNFRSRSNS
TSSREDNSKSRERGKGLPMEDTGNGTSGFNKRRAEGIDKSDKPKRNLQLKTRRLNPTNTI
SYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCS
ETAGGIPGLLLTLAGMGEEGMSVNLWGPSDLQYLVDAMKSFIPHAAMVHATSFGSDATAQ
SHASNFMNPIGLIKNEVVKISAILLRPSYIEGAAVKPGDMSVIYVCELPEIMGKFDPEKA
KALGLKPGPKFSELQSGISVKSDHQDIMVHPSDVMGPSVPGPVVFLVDCPTESHAQELLS
IQSLNCYTADYSDSPPQNVKTVTCIIHLSPASVITSPSYQKWMKKFFSSQHIMAGHEMKN
VEIPILKSSSRITARLNYLCPQFFPSPGFWSLKQLNCSNVEPIFSGEDYVLKAPEIISAE
NLLKFTLRPHAHLGLDKSNIPSLIAPSDVIEELVTEIPEIVDAAQHVRQFWHGSGETKGY
MTLGQDNKVMIEEPWLVDNALPSCLENIRRDDLEIVLLGTGSSQPSKYRNVSSVYINLFS
KGGLLLDCGEGTLGQLKRRYGLEGADIVVRNLKCIWISHIHADHHTGLSRILALRRDLLK
GMAHEPLVVVGPRQLKRFLDAYQKLEDLDMQFLDCRSTNLASWEAYEGNSEHKDHSATGN
PNNLEDVSTPTVSTEATLFARGSRMQSYWKRPGSPVDNAMSFPVLKSLKKVLSEAGLEAL
ISFPVVHCPQAFGIMLKAAERINAVGKIIPGWKIVYSGDTRPCPELVEASKGATVLIHEA
TFEDDLVEEAVARNHSTTKEAIEVGDSAGAYRIILTHFSQRYPKIPVFDETHMHKTCIAF
DMMSVNVADLPVLPKVLPYLKLLFKNEMIVDELDDAADAVSAVS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaatctcaaatctgcgcttcctcttgtcgcccataaagccctctctgcctttc
cctttctctaaacccaagccttattctctgttcaccgtcctctgttcttcttcttcctcg
agaagacaccgtaccacaccgaatcatcagtctctcaattttagaagcagaagtaatagc
acttctagtagagaagataatagcaagagtagagaaaggggcaaaggtctcccaatggaa
gatactggtaatgggacttctgggtttaataaaagaagggctgagggcatagataagagc
gataagcccaaaaggaatctccagttgaaaactcgcaggcttaatcctaccaatacaatc
tcttatgtgcagattctggggactggaatggatactcaggatacttcaccttcagttttg
ctcttttttgacaagcagcgttttatttttaatgctggcgagggattgcagcgattctgc
acagaacacaagattaagctatcaaagatagatcacatatttctatctcgcgtgtgctca
gaaacagccggtggaattccaggtttattgttgactttggctggcatgggagaagaagga
atgtcggtcaatttatggggcccttcggatcttcagtatttggttgatgcaatgaagtct
ttcattcctcatgctgccatggttcatgcaacgagttttggttctgatgctactgctcag
tctcatgcaagcaactttatgaatccaattggcctcattaagaatgaggttgtcaaaatt
tcagccattctcctacgcccaagctacatagagggagctgcagtaaagcctggtgatatg
tctgtgatatatgtttgtgaattgcctgaaattatggggaagtttgacccagaaaaagca
aaagctcttggtctgaaacctgggccaaaatttagtgaactgcaatcaggaatatcagtg
aagtcagatcatcaggatatcatggttcatccaagtgatgtaatgggtccctcagttcct
ggtccagttgtatttcttgttgactgcccaactgaatctcatgcacaagaattattgtcc
atacaatctcttaattgttacactgcagattactcagatagtccaccacagaatgtgaaa
accgtgacttgtatcattcatttaagtcctgcttctgtaataacctctccaagttaccag
aagtggatgaagaaatttttttcatcccagcacattatggctggacatgaaatgaagaat
gtggaaattcctattctgaaatctagttctagaatcactgcaaggcttaattacctatgt
cctcagttcttcccatctccaggtttttggtcacttaagcagcttaactgctcaaatgta
gagcccattttttcaggcgaggattatgttttgaaagctcctgaaatcatatcagcggaa
aatcttcttaagttcactttgcgtcctcatgctcatcttggattggacaaatccaatatt
ccaagtttgatagctccctcagatgtcattgaggagttggtgactgagattccagaaatt
gttgatgcagcacaacatgttcgccagttctggcatgggtctggagaaacgaaaggatac
atgacccttgggcaagacaataaagttatgattgaagagccatggctagtagacaatgct
cttcctagttgtttggaaaacataaggagagatgacctggagattgtgcttctggggact
ggttcatctcaaccttctaaataccgaaatgttagttctgtctatattaatctcttctct
aaagggggtttgcttctagactgtggggaaggaactcttggacaactgaaaagaagatat
ggtctggaaggtgctgatattgttgtaagaaatctgaagtgtatttggatttctcatatt
catgccgatcaccatacaggattatcaagaatacttgctttgcgacgtgacttgttgaag
ggcatggcccatgagccattagttgttgttgggccaaggcagcttaagagatttctagat
gcgtatcaaaaattggaggacctagatatgcagttccttgattgtaggagcaccaatttg
gcctcgtgggaagcttatgaaggcaatagtgagcataaggatcactcagctacaggaaat
ccaaataatctcgaggatgtaagcacacctacagtgagtactgaggcaactctgtttgct
agaggcagccgtatgcagagctattggaagagaccaggcagtccagttgacaatgcaatg
agtttcccagttctgaaaagtttgaagaaagtgctcagtgaagccggattagaggcattg
attagtttccctgttgtgcattgccctcaggcatttggcattatgctgaaggcagcagaa
agaattaatgctgttgggaaaataataccagggtggaagattgtgtactcaggtgacact
aggccctgtccagaactggtagaagcatctaagggagcaactgtccttatacatgaggca
acttttgaggatgacttggtggaggaagctgtggccagaaaccatagcacaacaaaggaa
gccatagaagtaggagactcagctggtgcataccgtatcatcctcacccacttcagtcag
agatacccaaaaatacctgtttttgatgagactcacatgcataaaacatgcattgctttt
gacatgatgagtgttaacgtagcagatttgcctgtgcttcctaaagtactcccttacctt
aaattgctgttcaaaaatgagatgatagttgatgaattggatgatgctgcagatgctgta
agtgcagtttcttga
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