Manihot esculenta (cassava): 110626683
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Entry
110626683 CDS
T05761
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110626683
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110626683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
PQQ_2
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
110626683
NCBI-ProteinID:
XP_021628417
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All DBs
Position
11:complement(21188018..21192871)
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AA seq
481 aa
AA seq
DB search
MKKRARTTPDKAVLNVLQREVGDLSTRNFAHRLAASEDLVLRLDLYKKLDKHRGCVNTVS
FNTDGDILVSGSDDRRVILWDWETGRIKLSFHSGHNNNVFQAKIMPYTDDRSIVTCAADG
QVRHAQILERGAVETALLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTRRATEL
FTCQPTVDRSNYMSVVHLNAIAIDPRNPNLFAVAGSDEYARVYDIRMYKWDGSTEFGRPT
DFFCPPHLIGDEKVGITGLSFSDQSELLVSYNDEFIYLFTQDMGLGPNPDPSSPVSAGSD
TKDLEPMDADEKNAPQVYKGHSNRETVKGVSFFGPGCEYVASGSDCGRIFIWKKKGGTLI
RVMEADKHVVNCIEPHPSTTALASSGIETDIKIWTPKAFERATLPANIEQKPKGRGWMFP
VVSPQDLMLQLFSLRRRRTSSEQNEESSAASRELLELILTFNASADSDDGGDSISREDLF
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagagctagaaccacccccgacaaggcggttcttaatgttttgcaacgggag
gttggtgacctctccacccggaattttgctcaccgtctcgctgcttctgaggatcttgta
ctgcgacttgatctatacaagaagctagacaagcacaggggttgtgtaaatactgttagc
ttcaatactgatggagacattctggtgtcaggttctgatgacagacgggttatactctgg
gactgggaaactgggcgtatcaagctttctttccattctggtcataataacaatgttttt
caagccaaaattatgccttacacagatgatcgaagcattgttacttgtgcagcagatggt
caggttcgacatgctcaaattctggagcgtggagctgtggaaactgcattgctagcaaaa
caccaagggcgagctcataagctggctattgagcctggtagccctcatatattttatact
tgtggcgaggatggattggttcaacattttgatttgagaactaggcgtgccacagaactt
ttcacttgccaaccaactgttgataggagtaattacatgtcagttgtccatctaaatgca
attgcaattgatccaaggaacccaaatctctttgctgttgctgggtcagatgagtatgct
cgagtttatgatatccgcatgtacaaatgggatgggtcaactgaatttggtcgacctacg
gatttcttttgtcctccacatttgattggtgatgagaaagttggaataacaggcttgtcg
ttctcagaccagagtgagcttctagtctcatataatgatgagttcatctatcttttcaca
caagacatgggattgggtcccaatccagacccatcctctccagtttccgctggcagtgat
acgaaagatttggagcccatggatgctgatgaaaaaaatgcgccccaagtatacaaaggg
cacagtaaccgtgagactgtgaaaggggtaagcttctttgggcctggatgcgagtatgtg
gcgagcgggtcagactgtggtcggatattcatttggaagaaaaagggaggaacgctcatt
cgtgtaatggaagctgataagcatgtggtcaactgtattgagcctcatcctagtacaact
gctcttgctagtagtggaattgagactgatataaagatttggactcccaaagcctttgag
agagcaactctgcctgcaaacattgaacagaaaccgaagggcagaggttggatgttccct
gtagtttcaccacaagacctgatgttgcaactgttttcattgcgaaggcggagaactagc
tcagagcagaatgaagagagctcagctgctagtagggaacttttagagcttatattgaca
ttcaatgccagtgcagattcagatgatggaggtgattcaataagtcgtgaagacttgttt
ggctag
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