KEGG   Manihot esculenta (cassava): 110626763
Entry
110626763         CDS       T05761                                 
Name
(RefSeq) squalene synthase
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc00100  Steroid biosynthesis
mesc00909  Sesquiterpenoid and triterpenoid biosynthesis
mesc01100  Metabolic pathways
mesc01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    110626763
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    110626763
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:mesc01006]
    110626763
Enzymes [BR:mesc01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     110626763
Prenyltransferases [BR:mesc01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   110626763
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 110626763
NCBI-ProteinID: XP_043817784
LinkDB
Position
11:14488427..14498688
AA seq 413 aa
MGSLGAIFKHPDDFYPLLKLKMAAKHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLGT
QLRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHIYDRDWHFSCGSKDYKVLMD
QFHHVSTAFLALGKSYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFYASQLEDLAPDGLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVHKL
EDLKYEENSVKAVQCLNDMVTNALTHVDDCLNYMSALRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDANDPNAEKTLSRV
EAIQKTCRESGLLNKRRSYIIRSEPRYSSALIVLLVIILSIISALHLGNRPTN
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgggaagtttgggagcgatttttaaacacccagatgatttttacccgcttttgaagttg
aaaatggctgcgaagcatgcagagaaacagatcccaccagagcctcactggggtttctgt
tactccatgcttcacaaggtctctcgtagttttgctctcgtcattcaacagctcggcact
cagcttcgtgacgctgtatgtatattctatttggtacttcgagcccttgatacagttgag
gatgatacaagcatacctactgatgtcaaagtgcctattctgatagcttttcaccgtcac
atatacgatcgtgattggcatttttcttgtggtagcaaggactataaagttctcatggac
caatttcatcatgtttcaactgcctttctagcgcttgggaaaagttatcaggaggcaatt
gaggatattacaaaaagaatgggtgcaggaatggctaaattcatatgcaaggaggtggaa
acagttgatgactatgatgaatattgccattatgtagctgggcttgttggactaggcctg
tccaagcttttctatgcctctcaattagaggatctggcaccagatggcctctccaactca
atgggtttatttcttcagaaaacaaacatcattcgagattatttggaggatataaatgag
atccctaagtcacgcatgttttggcctcggcagatctggagtaaatatgttcacaaactt
gaggacttgaaatatgaagagaactcagtcaaggcagtgcaatgcttaaatgatatggtt
actaatgctttgactcatgtggatgattgcttgaactacatgtctgcattgcgagatcct
gctatatttcgattttgtgccatccctcagatcatggcaattggaaccttagcattgtgc
tacaacaatattgaagtattcagaggcgtagtgaagatgaggcgtggtctcactgctaag
gtcattgaccgaacaaaaactatggctgatgtctatggtgctttctttgatttctcctgt
atgctcaagtccaaggttgacgctaatgatcctaacgcggaaaagacattgagcagggtg
gaagctatacagaaaacttgcagggagtctggacttctaaacaaaaggagatcttacata
atcagaagcgagccaagatatagttctgctttgattgtcctacttgttatcatattgtcc
atcatttccgctttgcacttggggaaccgaccaacgaactaa

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