KEGG   Manihot esculenta (cassava): 110626766
Entry
110626766         CDS       T05761                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110626766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110626766
Spliceosome [BR:mesc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110626766
 Complex B
    110626766
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 DAG_kinase_N Torus DNA_alkylation
Other DBs
NCBI-GeneID: 110626766
NCBI-ProteinID: XP_021628534
LinkDB
Position
11:32288560..32291651
AA seq 331 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMITP
GVDAQGNPIDPRKIQEHFEDFYEDLFEELSKYGEIESLNVCDNLADHMVGNVYVQYREDE
DAAKALQSLTGRFYAGRPIIVDFSPVTDFREATCRQYEEKSCNRGGYCNFMHLKRISREL
RRHLFGRYRQRSSHSRSRSPYRYSSRSRSPYRHRSHEEYYHGGRGAGRWYDDRDRYYGSR
SRRHRSISPDHWRGRSRSPGGRRDRSPVREGSEERRAKIAQWNREREQQESAKKVNTDIG
CNNHQGGDNGYMQNGNQDHGYQRFLPQQGVY
NT seq 996 nt   +upstreamnt  +downstreamnt
atggctgagcatttggcgtcgatttttggaacggagaaggatagggttaattgcccattt
tacttcaaaattggtgcgtgcaggcatggagaccgatgttctagactccataacaagcca
actattagtcctacgcttttgctttcgaatatgtatcagcgtcccgacatgatcactcct
ggagttgatgcccagggtaacccaatcgatccccgcaagatccaggagcactttgaggat
ttctatgaggatctttttgaggaactaagcaaatatggtgaaattgagagcctgaatgtc
tgtgacaaccttgccgaccacatggtggggaatgtgtatgttcagtatagagaggatgag
gatgctgcaaaagcacttcagagcctgaccgggagattttatgctggtcgtcccatcatt
gttgatttctcccctgtgacggacttccgagaagccacctgcaggcaatatgaagagaaa
tcgtgcaaccgtggtggctattgcaatttcatgcatctcaaaagaatcagcagggagttg
aggcgtcatttatttgggaggtatcgacaaaggtctagtcacagccgaagtagaagccct
tatcggtatagcagccgaagcagaagcccttataggcatcgcagccatgaagagtactat
catggtggtcgtggtgctggtagatggtatgatgatcgggatcgttattatggaagtcgg
agcaggaggcacaggagtatcagccctgaccactggagaggacgaagtagaagccccggt
ggaaggcgtgatagaagccctgttagggaaggcagtgaggagaggcgtgctaaaattgcc
caatggaacagggaaagggaacaacaggaaagtgcaaaaaaggtcaatactgacattggc
tgcaataaccatcaaggtggtgataatggctatatgcaaaatggcaatcaggatcatgga
tatcagcggtttctaccacagcaaggagtatattga

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