Manihot esculenta (cassava): 110626805
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Entry
110626805 CDS
T05761
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110626805
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110626805
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110626805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-ANAPC11
zf-C3HC4
zf-RING_16
PHD
zf-RING_5
FANCL_C
zf-RING_Vps41
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
110626805
NCBI-ProteinID:
XP_021628601
LinkDB
All DBs
Position
11:22967297..22975084
Genome browser
AA seq
312 aa
AA seq
DB search
MENNVNLGSGEAKNSREQEQEQEQVLNLDSANDTGDQEEPQPPRHSSRRTPFTNLSQVDA
DLALARTLQEQERAYMMLRLNNDGSDYGSWEAGSYLHDDEDDFGDPDVETEGGDEDEDED
EDEDGTDDGMDAFDAHAHDDAGVDNIPGIHLDPSMFSSDEAYARALQDAEEREMAARLLA
LAGINDREVEDSEDHGGNSQDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPS
VNYKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKKFHDARGKM
DAPCCCSIHPQP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacgttaacttaggttcaggagaagcaaagaatagtagggaacaagaacag
gagcaggaacaggtccttaatttagattctgcgaatgatactggagaccaagaggaaccc
cagcctcctcgtcactcttccagaagaactcccttcactaatcttagtcaggttgatgcg
gacctcgctcttgcccgcacacttcaagaacaggaaagggcatacatgatgttaagattg
aacaatgacgggagcgattatggaagttgggaagctggaagctatttgcatgatgatgag
gatgattttggtgatcctgatgttgaaactgaaggaggcgatgaggatgaggatgaggat
gaggatgaagatggcactgatgatggcatggatgcatttgatgcacatgctcatgatgat
gctggagttgataatattcctggcattcatcttgacccttctatgttttctagtgatgag
gcctatgccagagccttacaggatgctgaagaaagagaaatggctgctagattgttggct
cttgctggaataaatgatcgagaagtagaggacagtgaggatcatggtggtaactctcag
gatgcatgggaggaggttgatccagatgaactttcatacgaggagttgcttgcactgggt
gaagtcgttggaactgagagtagagggctttctgctgatacaattgcctctttgccttcg
gtaaattacaaggcaggaagcagtcagaatggaagtaatgattcctgtgttatatgtcga
ttagattatgatgatggtgagaccctgacagtactttcttgcaagcattcctatcattca
gaatgcataaatgattggttgaaaataaacaagaagttccatgatgctcgtggaaagatg
gacgctccctgctgttgcagtattcatccccagccttaa
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