Manihot esculenta (cassava): 110626837
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Entry
110626837 CDS
T05761
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00900
Terpenoid backbone biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110626837
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mesc01006
]
110626837
Enzymes [BR:
mesc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
110626837
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
110626837
2.5.1.29 geranylgeranyl diphosphate synthase
110626837
Prenyltransferases [BR:
mesc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
110626837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
PFam54_60
Motif
Other DBs
NCBI-GeneID:
110626837
NCBI-ProteinID:
XP_021628652
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All DBs
Position
11:complement(21340876..21343384)
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AA seq
340 aa
AA seq
DB search
MVFSSVISPSPVLLLPRRLPNRRLSKPRLSIHSSSSSLSISGNSKSTQFDLKTYWTTLMS
EINQKLDQAISIQYPEQIYEAMRYSVLAKGTKRAPPVMCVAACELFGGNRLAAFPTACAL
EMVHAASLIHDDLPCMDDASSRRGQPSNHVVYGVDMAILAGDALFPLGFRHIVYNTPSDL
VPESRLLRVIVEIARAVGSTGMAAGQFLDLEGSPNSIEFAQEKKYGEMGECSAVCGGLLA
GAEDHEIQRLRRYGRDVGVLYRVINDILEARTTSKEDENKKKKGKSYVSLYGIEKAMEVA
EELRTKARKELDGFEKYGERVEPLYGFVDYAAERGFSLES
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggttttctcttcagttatatcaccatcacctgtcctactcctccctagaaggcttcct
aatcgtcgcctatcgaaacccagattgtcaattcactcttcttcttcttctttgtcgatt
tcaggcaattcgaagtcgacccagttcgatttgaagacttattggacgacccttatgtcc
gagatcaaccagaagctagaccaggctatttcgattcagtacccagagcagatctatgag
gccatgagatattccgtgctcgcaaagggaaccaagcgggccccgcctgtcatgtgtgtg
gctgcctgtgagctattcggtggtaatcgtctcgcggcctttcctactgcttgtgctctt
gaaatggtccatgcagcttctttgattcatgatgatcttccctgcatggatgatgcctca
tcacgccgaggccagccttcaaaccatgtagtctatggtgttgacatggcaatccttgct
ggggatgcacttttccctcttggcttccgccacattgtctacaacacaccctcagatctt
gttccagagtctcgccttctccgagtgattgttgagattgctcgtgctgtgggttccaca
ggaatggctgctggtcagttccttgaccttgaaggtagtccaaattctatagagtttgct
caagagaaaaaatatggtgaaatgggtgagtgctctgcagtgtgtggaggattgctggct
ggggctgaagatcatgagatacaaaggttgaggaggtatggaagagacgttggggtatta
tatcgagtgattaatgatatattggaagcgagaacgacgagtaaagaagatgagaataag
aaaaagaaagggaagagttatgtcagtctatatgggattgagaaggcaatggaggttgca
gaagagctgagaaccaaggctaggaaggaactagatgggtttgagaagtacggcgagaga
gtagagccgctatatggctttgtcgattatgctgctgaaagaggtttcagtctggagagt
tga
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