Manihot esculenta (cassava): 110627207
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Entry
110627207 CDS
T05761
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
mesc04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110627207
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110627207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110627207
Membrane trafficking [BR:
mesc04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
110627207
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SlyX
DUF7515
Motif
Other DBs
NCBI-GeneID:
110627207
NCBI-ProteinID:
XP_021629182
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Position
11:1656944..1660437
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AA seq
218 aa
AA seq
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MVKLTMIARVTDGLPLAEGLDDGRDVKEIEMYKQQVKALFKNLTTRQNEPSRMSIETGPY
VFHYIIEGRVCYLTMCDRTYPKKLAFQYLEDLKNEFERVNGVQIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNIAKLNDELYEVHQVMTRNVQEVLGVGEKLDQVSEMSSRLTSESRI
YADKARDLNRQALIRKWAPVAIVLGVVFLLFWVKTKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacaatgattgcccgtgtcactgacgggcttccactagctgagggattg
gatgatggtcgtgatgtgaaagaaattgaaatgtataaacaacaagtgaaggctttgttt
aagaatctcactacacgccaaaatgagccttcaaggatgtccattgaaactggtccttat
gtcttccattatattattgaaggacgtgtttgttacctcacgatgtgtgaccgtacttat
cctaagaagctggcctttcagtacttggaagacctgaaaaatgaatttgagcgtgttaat
ggggttcagattgaaactgctgctcgaccttatgccttcataaagttcgatactttcata
cagaaaacaaagaaattgtaccaggacacccgtactcagcggaatattgcaaagttgaat
gatgaactctatgaagttcaccaagtaatgactcgcaatgtgcaggaagtacttggtgtt
ggtgaaaaactagaccaggtcagcgaaatgtcaagtcggttaacatcagaatctcgtata
tatgctgacaaggcgagggatttgaatagacaggccttaattagaaagtgggctcctgtc
gctatcgtgttgggagttgtcttcctccttttctgggttaaaacgaagatctggtga
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