Manihot esculenta (cassava): 110627212
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Entry
110627212 CDS
T05761
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03250
Viral life cycle - HIV-1
mesc03272
Virion - Hepatitis viruses
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110627212
03272 Virion - Hepatitis viruses
110627212
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110627212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110627212
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110627212
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
110627212
Exosome [BR:
mesc04147
]
Exosomal proteins
Proteins found in most exosomes
110627212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
Motif
Other DBs
NCBI-GeneID:
110627212
NCBI-ProteinID:
XP_021629188
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Position
11:complement(1010969..1013484)
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AA seq
418 aa
AA seq
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MVPPPNHQATQQFLSSVLSQRGPSSLPYTEDTKWLIRQHLLSLIGTYPSLEPKTATFTHN
DGRSVNLLQADGTIPMPFQGVTYNIPIIIWLMESYPRHPPYVYVNPTRDMIIKRPHPHVN
PSGLVSIPYLHNWIYPSSNLVDLVRELSTIFGRDPPLYSQRRPNPNPCPSPSQNINPNPN
YAANPSNLSHSSSLGSVGPAGGHVGYPRPMNRPYPPSPYSGSTGGPPGRPQTEDAAEVYK
RNAINKIVETVHVDIMQLRKAREVEMEGLFSAQAVLRRREEDINKGLKEMQDEMEGLEAQ
LQVVLMNTDVLEAWVRENSGKTKGNAEDLDVDNVFECTDALSKQMLECTAADLAIEDVVY
SLDKGVQEGAVPFDQYLRNVRLLSREQFFHRATAAKVRATQMQAEVASMAARAPHYAS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaccacctaaccaccaagccacccagcaattcctctcctcagtcctctctcaa
cgcggcccctcctccctcccttacactgaagataccaaatggctaatccgccagcacctt
ctctccctcatcggcacttacccttctctcgaacccaaaaccgctaccttcacgcacaac
gatggtcgttccgtcaacctcctccaagccgacggcaccattcccatgccatttcagggg
gtcacttacaacattccgatcatcatctggctcatggagtcctacccccgccacccacct
tatgtctatgtgaatcccacgcgtgatatgattatcaagcggcctcaccctcatgttaac
ccttcaggtttggtctccattccttatttgcacaattggatctaccctagctctaatctc
gtcgatctagttcgtgaattaagtaccatttttggccgtgaccctcctctctattcccaa
cgccgcccaaaccctaatccttgtccgagccctagccaaaacatcaaccccaaccccaat
tatgctgcgaatccatcaaatttatcgcattcttcgagtttgggatccgtgggccctgct
ggagggcatgttggatatccgcgtccgatgaataggccctacccgccatctccgtacagt
ggtagtactggtgggccgccagggcggccacaaacggaggatgctgcggaggtttataag
aggaacgcgatcaataaaattgtggagaccgttcatgtggatatcatgcaactgagaaaa
gcaagggaggtggagatggagggtttattcagtgcgcaggctgtgttgaggaggagggag
gaggacattaataaggggcttaaggagatgcaagatgagatggaggggttggaggcgcaa
ttacaagttgtattgatgaatacagatgtcctagaggcgtgggtcagagaaaacagtggg
aaaacgaaagggaatgcagaggatttggatgtggacaatgtgtttgagtgcactgatgct
ctatcaaagcagatgttagagtgcacagcagctgatttagcaattgaggatgttgtttat
tccttagataagggagtacaggaaggggcagtgccctttgatcaatacttaaggaatgta
aggttgttatcaagggagcagtttttccatagggctactgctgcaaaagttagggccacc
cagatgcaggctgaggttgctagtatggctgctagagcgcctcattatgcttcttga
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