Manihot esculenta (cassava): 110627470
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Entry
110627470 CDS
T05761
Name
(RefSeq) transcription factor MYB30
KO
K09422
transcription factor MYB, plant
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110627470
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
110627470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Myb_DNA-bind_7
SLIDE
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
110627470
NCBI-ProteinID:
XP_021629490
LinkDB
All DBs
Position
12:2794694..2796065
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AA seq
271 aa
AA seq
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MVRAPCCEKMGLKKGPWTAEEDQILVNYIQQYGHGNWRALPKQAGLLRCGKSCRLRWINY
LRPDIKRGNFTREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKQNP
GTPEIKTTSIAMISRVAQESKQESELVTLSNLPGPESPEGVEYRSISPQQCSSSEISSVI
TGDDASHNNMSSMKVEESDDFPEMDENFWSEVLSSDNSSSGSNFPAAAQFQIPFSTVGNA
MEPAVQYGYDSMDFWYNLFTKAGESPELPEI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagctccttgctgtgagaagatgggactgaagaaaggtccatggactgctgaa
gaagatcagatccttgttaattacattcaacaatatggccatggcaactggagggctctt
cccaaacaagctggtttattgaggtgtggaaagagctgcagactccgatggataaattac
ctcagaccagatattaaacgaggaaatttcaccagagaagaagaggatacaatcatcaaa
ttgcatgaaatgctaggaaacagatggtcggcgattgcagcgagattaccgggacggaca
gataatgaaataaaaaatgtatggcacactcatctgaagaaaagactgaaacaaaatcct
ggtaccccagaaataaaaacaacctccattgctatgatctccagagttgctcaagaatcc
aagcaagaatctgagttggtaaccttatcaaatcttccaggacctgagtcgcctgagggc
gtagaatatagatccatttcgccgcagcagtgctcttccagtgaaatctcatcggtgatc
acaggtgatgatgccagtcataataatatgtcttccatgaaggtggaagagtcggatgat
tttccagaaatggatgagaatttctggtcggaggtattgtcgagcgacaactcaagctcg
ggaagtaattttccggcggcggcacaatttcaaattccattttctacagtaggaaatgcc
atggaacctgcagtccaatatggctatgatagcatggatttttggtataaccttttcaca
aaagctggggaatcaccagaattaccagaaatttga
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