Manihot esculenta (cassava): 110627704
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Entry
110627704 CDS
T05761
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110627704
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110627704
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110627704
NCBI-ProteinID:
XP_021629745
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Position
12:complement(3738310..3743248)
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AA seq
443 aa
AA seq
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MAVSLRCFCIFSLMILVLFVNVKASTERSQLKSRLEEKQLLQSSKNSSMAVDRSGDAWNE
HAVEDPEEVASMVVESIHNSTARRNLGFFSCVTGNPIDDCWRCDPNWQRNRKRLADCGIG
FGRNAIGGRDGRYYVVTDPRDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIM
NSFKTIDARGVNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPTHYGWRTMA
DGDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYT
RDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRY
LAPNNGFAKEVTKRVETANGVWKHWNWRSEGDLMLNGAYFTPSGAGASASYARASSLGAK
SSSMVGAITSSAGALFCRRGHQC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcgctgagatgtttttgtatattttcattgatgattctagtcctgttcgtt
aatgtgaaggcatcaacagagaggagccagctgaaatctaggttggaggaaaaacagctg
ttgcaaagctccaagaactcatcaatggcagtggataggtcaggtgatgcatggaatgag
catgctgttgaggatccggaggaggttgcttctatggttgttgagagcatacacaacagc
acagcaagaaggaatttagggttcttctcttgtgtaacgggcaacccaattgatgattgt
tggagatgcgaccccaattggcagcgaaacaggaagcgtcttgctgactgtgggattggt
tttggacgcaatgccattggtggtcgtgacggcagatactatgtcgtgactgatcctcgc
gatgatgacccagttaatccaaaacctggcactctccgccatgctgttattcaagacaga
cctttgtggattgtgttcaagagagacatggtgatcactcttaagcaggaacttattatg
aacagtttcaagactattgatgctcgtggagttaatgtccacattgccaatggagcttgc
attactatccaatttatcactaatgtcattattcacggtctccatatccatgattgtaag
cctaccggcaatgccatggttcgtagctcgcctactcattacggatggaggacgatggct
gatggagatgggatttccatttttgggtctagtcacatttggattgatcataattctcta
tcgaattgcgcagatggccttattgatgctataatggggtcaactgccattactatttcg
aataactatttcactcaccacaatgaggttatgttattgggtcacagcgactcctacaca
agagataagcagatgcaagtaacaattgcctacaaccattttggcgaggggcttatccag
agaatgccaaggtgtaggcatgggtatttccatgtagtgaacaatgactacacacattgg
gaaatgtatgccattggtggaagtgccgaacctaccattaatagccaaggaaacagatat
cttgcccctaacaatggttttgctaaagaggtgacaaagagggtggagacagcaaatggt
gtgtggaagcactggaattggaggtctgagggagatctcatgcttaatggagcctatttc
actccatcaggggccggagcttcagctagctatgccagggcctcaagcttaggggccaag
tcctcttccatggttggcgccattacttcaagtgctggtgctcttttctgtcgcaggggt
caccaatgttaa
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