Manihot esculenta (cassava): 110627857
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Entry
110627857 CDS
T05761
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110627857
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110627857
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110627857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
110627857
NCBI-ProteinID:
XP_021629923
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Position
12:complement(35900684..35901787)
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AA seq
223 aa
AA seq
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MSASTSTTQLFQDFLGDFYSRRLLLQAPLYQSPAAAAPQAPEYSNNSSETYTGDKTFDAN
VVMVLSVLLCALICSLGLNSIIRCALRCSNLVASESASNSTTQLANTGVKRKALKTFPTV
NYSTDLKLPGLDTECAICLSDFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCL
IETCQKIVGCSQATSSEPPPVQESIVNIAPLEPEGLIRNYRVS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttctacttcaaccactcaactatttcaagattttctaggggacttttactca
aggagattgctactgcaggcccccctttaccaatcaccagctgcagcagctcctcaagct
ccggagtacagcaacaactcatcagaaacttacactggagataaaactttcgatgcaaat
gtggttatggtcctctcagtcctcttatgtgccttgatttgctcacttggattgaattcc
attattaggtgtgcattaaggtgctctaacttagtagcttctgagtctgctagcaattcc
acaactcaattagccaatacaggagtcaagcgaaaagcattaaagactttcccaacagta
aactactcaaccgacctgaagctgcctggtctggacacagagtgtgcgatatgtctttca
gatttcacacctggtgagcgtgtgcgtcttttgcccaagtgcaaccatggatttcatgtc
cggtgcatcgacaagtggctcagttcacactcgtcctgccctacttgcagacactgcctg
attgagacatgccaaaagattgttggttgcagccaagctacctcatcagaacctccacca
gtgcaagaaagtattgtgaacatagcaccactagaacctgaaggtttgatacgcaattac
agagttagctaa
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