Manihot esculenta (cassava): 110627861
Help
Entry
110627861 CDS
T05761
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110627861
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110627861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
CENP-K
PspA_IM30
SKA1
TEX13
Motif
Other DBs
NCBI-GeneID:
110627861
NCBI-ProteinID:
XP_021629926
LinkDB
All DBs
Position
12:34569233..34574351
Genome browser
AA seq
529 aa
AA seq
DB search
MNSIFSEQILADKLAKLNSTQQCIETLSHWCIFHQSKAEQVVATWEKQFHSSQMTQKVPL
LYLANDILQNSKRKGNEFVSEFWKVLPAALKEVVEKGDDRGKNVVSRLVNIWEERRVFGS
RARSLKDVMLGEDLPPPLEFSKKRSRSVKIMKRDSRSIRTKLTIGGAAEKIVSAYHLVVS
EFPTEEAEMSNCKSIVNRVRKMEKDVDIACNNGKDPKRKSLAKDLEEEENLLKQCVEKLK
SVEASRVALVSQLKEALHEQESDLENIRTQMQVAQAQAEEASNMQKRLNDEYYVPSATQP
VDINAKAGQTPKRTAAAIAAEVADKLAASSSSQMIMHSVLSTFAAEEAKNAGITKASTPS
NSITTTPTNSVVDSLAKPDKSLSLPISDPSVFMPTVSLSAPSNHYQSVMLSPPTMQNQAH
SSQPQFHILPNSSQQYLQPSGGIMTGYGYGSISPLPPGPPPPPPYMVSPMVPLTQQPSQI
TQQQPMPMALQQAPITQQQPMPPTQQPPGPSFRPLQPPVMMYYNHPPHS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtattttcagtgaacagatacttgcagacaagcttgctaagctgaacagcacc
caacaatgtattgaaactttgtcacactggtgcatatttcatcaaagcaaagcagaacaa
gttgttgcaacatgggagaaacaattccacagttcacagatgactcagaaagttccttta
ctttatcttgcaaatgatattctacagaacagtaaacgtaaaggaaatgaatttgtctca
gagttttggaaggttcttcctgctgcacttaaagaagttgttgagaaaggtgatgatcgg
ggcaagaatgtggtctcccgattggtaaacatatgggaagaaagaagagtatttggatcc
cgtgcccggagcctcaaagatgtaatgcttggtgaagatttacctccaccattggagttt
agcaaaaaacgttcacgctctgtcaaaattatgaaacgggattcccgatccattagaacg
aaattaacaattggaggtgctgcggaaaaaattgtatcagcataccacttggtggtcagt
gaatttcctacggaagaggcagagatgagtaattgtaagtctatagtcaaccgtgtgagg
aagatggagaaagatgttgatattgcttgtaataatggaaaagatccaaaaagaaaaagt
ttagcgaaagacttagaggaggaagaaaatcttttgaagcaatgcgttgagaaactaaaa
tcagttgaagcaagtagagtagcacttgtgtctcagttaaaagaagctctacatgaacag
gagtctgatctggagaacattcgaactcagatgcaggttgcccaggcacaggcggaggaa
gccagcaacatgcaaaagcggctcaatgatgaatattatgtacccagtgcaactcaacca
gttgatataaatgcaaaagcagggcaaacacctaagaggacagctgcagccattgctgct
gaagtagcagataagcttgcagcttccagttcctctcaaatgattatgcactctgttctt
tctacatttgcagcagaagaagcaaagaatgcaggaataacgaaggcctcaacaccgtca
aattcgataactacgacgcccacaaactcagtcgttgattccttggcaaagcctgacaag
tccctgtccttgcccatttcagatcccagtgtttttatgccaacagtgtcactttctgct
ccgtctaaccattatcagtcggttatgctttccccacctaccatgcagaaccaggcccat
agctctcaacctcagtttcatatacttccaaactcatcccaacaatatttgcagccatca
gggggtattatgactgggtacggctacggaagcatttctcccttgcctccagggccacct
ccacccccaccatacatggtgagtccgatggtgcctttgactcaacaaccatcacaaata
actcagcagcaaccaatgccaatggcactgcagcaggccccaataactcagcaacaacca
atgcctccaacccaacaaccgccaggtcctagttttcgcccccttcagccacctgtgatg
atgtattataatcaccctccccattcttaa
DBGET
integrated database retrieval system
