Manihot esculenta (cassava): 110627872
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Entry
110627872 CDS
T05761
Name
(RefSeq) CDT1-like protein a, chloroplastic
KO
K10727
chromatin licensing and DNA replication factor 1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesc03032
]
110627872
03036 Chromosome and associated proteins [BR:
mesc03036
]
110627872
DNA replication proteins [BR:
mesc03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
110627872
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110627872
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Gene cluster
GFIT
Motif
Pfam:
CDT1_C
CDT1
DUF3958
Pox_int_trans
Motif
Other DBs
NCBI-GeneID:
110627872
NCBI-ProteinID:
XP_021629938
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Position
12:complement(2701665..2705225)
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AA seq
618 aa
AA seq
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MSDLFISRMSSSRSSISPIPFKSKKYLQSTPKSKPANPITTQTPDKLPAELPPRLRNRRV
ALSVKEVREIAQGNRDGPHRNQTEQIVKSARRQISTWPEESIGESHKPRNAAVEEGPARL
PAKYETLGEFFDSLDSSIRLLKLKGSMSTFTNVSPKIECLTDRRFSHQHLAQLKYILPEA
IEIKRVLMFDERTSCMKPDLHVTLNVDAIECNGNLKSESKNLHLRKVFRARLADFYKAHP
EGDEVPEEMLPEPFNRSKQDLSSEITKAPTTSSHIETSADAHVGQNPNSSLPVETKPLER
QQPAVASHFSRSFRRHFSQKITKCEAANANPNPPKICSQPSILQISQPCFDKISSSEEAS
ASASSLTRMPFESTTDGEKFSAGVHTPCLPATPCKEINSTNYRDNSPKKIGSFQSTPAKL
ASPSSTLMSMTPALHPPKRCCMSPDDGTTSLADKLTRRPSRTRSLKFETPEKNVVHELND
IEDVSADDDDILNILPESLLQSIREKERKVQEERDPAISQAKKRRQMIACLPKLFNMIHF
LFQSIKRTVITKEELIHKIIASHSDIVDRREVEEQLKLLLELVPEWISEKLATSGDLLFC
INKLSSPETTRARLEQAK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttatttatcagcagaatgagctcttcgagatcctctatatctccaatcccc
ttcaaatcaaagaaatatctccaatcaactccaaaatctaaacccgcaaaccctatcact
acccagaccccagataagctgcctgcggaactcccaccccgcctccggaaccgtcgcgta
gcgctttctgtgaaagaggttagggaaatcgctcaaggcaatcgagatggacctcaccgt
aatcagactgagcagatcgttaagtccgcccgaaggcagatctcgacttggcccgaggaa
tccattggcgagtcgcacaagccacgcaatgctgcagttgaagaggggccagctagactt
ccggcgaaatatgaaactttgggcgagttttttgatagcttggatagttcaattaggctg
ttgaagttgaagggctccatgtctacattcactaatgtttcccctaaaatagagtgctta
acagataggagattttctcatcaacatttggctcaattgaagtatattttgcccgaagcg
attgagataaagagggtactcatgtttgacgagcgaaccagttgtatgaagccagatctt
catgtcactttaaatgtagatgcaattgaatgcaacggtaatttgaaatcggaaagtaag
aatctgcatttgaggaaggtcttccgtgctcgacttgcagatttttataaagcccaccca
gagggtgatgaagttcctgaggaaatgctgccagagcctttcaacagatcaaaacaagat
ctgagttcagaaattactaaagctcccaccacatcatcacacatagagacatcagctgat
gcacatgtaggccaaaaccccaactcctcattgcctgtagagactaagccacttgaaaga
cagcaaccagcagtggcatctcatttctcacgatctttcaggaggcatttctcccagaaa
attacaaaatgtgaggcagcaaacgctaacccgaatcccccaaagatttgctcccaacca
tcaattctacaaatttcacagccatgctttgacaaaatctcttctagtgaggaagctagt
gcttctgcctcatccctaaccagaatgccattcgaatcaacaactgatggagaaaaattt
tcagctggtgttcatacgccttgcctccctgccactccttgcaaagagataaactccact
aactatagagataattcacccaaaaaaataggaagcttccagtcaactcctgcaaaactt
gcttcaccttcttctacgttgatgtcaatgacacctgcattgcatccgccaaaaagatgt
tgtatgagcccggatgatggtaccactagcttagcagacaagctcaccaggcgtccatca
cgaactaggtctctaaaatttgaaactcctgagaagaatgtagtgcatgaacttaatgac
atagaggatgtgtcagctgatgatgatgatattttgaatattctccctgagagtcttctg
caatcaatacgagaaaaagaaagaaaggtccaagaagagcgagatccagccatctcacaa
gcaaagaagcggcggcagatgattgcctgcctcccaaagcttttcaacatgattcatttc
ttgtttcagtcaataaaaagaacagttatcacaaaagaggagcttatacacaagataatt
gcaagtcattctgatatagttgatagaagagaagttgaagagcagctaaaattgctgctt
gaactagttcccgaatggatctctgagaaattggcgactagtggggatttgctcttctgc
attaacaaactgtcaagccctgaaacaacacgtgcacgacttgaacaagcaaagtga
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