Manihot esculenta (cassava): 110628020
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Entry
110628020 CDS
T05761
Name
(RefSeq) heat stress transcription factor B-2b
KO
K09419
heat shock transcription factor, other eukaryote
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110628020
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
110628020
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GFIT
Motif
Pfam:
HSF_DNA-bind
NRBF2
HALZ
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
110628020
NCBI-ProteinID:
XP_021630153
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Position
1:26474989..26477514
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AA seq
338 aa
AA seq
DB search
MMPSPVEQTGESVSTGGGVGDSQRSLPTPFLTKTYQLVDDPSVDDLISWNEDGSTFIVWR
PAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFKRGEKGLLRDIQRRK
ISPMGVTTAAAATVTVAAIPPVARAVSPANSGEQQVISSNSSPATTQVATPILQITSCTT
TPELLEENERLRKENAHLSEELTRLKGLCNNIFSLMSNYASGQLEGHCNLPEGKPLDLMP
STKMVMRADEVAVSGGTKAVVATVAAEDDVSPKLFGVSIGVKRVRRDEEEEEGNEGNKHQ
EQSQDNETGSDVKSEPLDGKTGQSEHHDPSWLELGNDG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatgccatcgccggtagaacaaaccggcgaatcagtctcaactggaggaggggtagga
gactctcagagatctctcccaactccgtttctcacaaaaacttatcagcttgttgatgat
ccttccgtcgatgacctgatttcctggaacgaggacggatcgaccttcatcgtctggcgg
cccgctgaattcgccagagacttgctcccgaagtacttcaagcacaacaatttctctagc
ttcgttcgccagctcaacacctacggatttagaaaggtagtgccggatagatgggaattt
gcgaacgattgctttaagagaggagaaaaaggtttacttcgtgatattcaacgccggaaa
atctctccgatgggagtcacgacagcagctgcagctacggtgaccgttgccgcaattcct
ccggtagcgcgtgcggtttcccctgcaaattcgggcgagcagcaagttatctcatcgaat
tcgtcgccggctacgacacaggttgctactccgatcctccaaataacaagctgtactacg
acaccggagcttctagaagagaacgagaggctgaggaaagagaatgcgcatttgagcgag
gagttaactcggttgaagggcttgtgtaataatatattttcattgatgtcgaattacgct
tctggtcaattggaaggtcattgcaatttgccggaggggaagcctttagatttgatgcct
tcgacgaagatggtgatgcgggctgacgaagtggctgttagcggtggcacgaaggccgta
gtggcgacggtggcggcagaagacgatgtgagcccaaagctgtttggagtttccattggg
gttaagcgcgtgagaagggatgaggaggaggaagaagggaacgaagggaataagcatcaa
gaacaatcgcaggacaatgagactgggtccgacgtaaaatcagagccgttggatggtaag
actgggcaaagtgagcatcacgacccttcgtggctagagctgggaaatgatggttaa
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