Manihot esculenta (cassava): 110628080
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Entry
110628080 CDS
T05761
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110628080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110628080
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110628080
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
110628080
NCBI-ProteinID:
XP_021630237
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Position
12:26167827..26172785
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AA seq
368 aa
AA seq
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MERKLVVLGIPWEVDTEGLREYMSKFGELEDCIVMKERSSGRSRGFGYVTFASAEDAKNA
LSSEHFLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEAAFRRSLNMMMADKFF
HFEKYGDIIDLYMPKDHSSKTHRGIGFITFSSADSVDSLMVDTHELGGSTVVVDRATPKE
DDFRPVGRMAHVGYGAYNAYISAATRYAALGAPTLYDHPGPMYGREPARGMGKKIFVGRL
PQEATAEDLRLYFGRFGHILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGH
QVAIDSATPIDDAGPSGNFMMNAAPSFGGYGGPMRNFGRMYGSLDFDDWGYGMGSARPSR
ADWRYRPY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaaagcttgtggttttgggtattccgtgggaggtggatacagagggtttgagg
gaatatatgagcaaatttggagaattggaagattgtattgtcatgaaggagcggtcatca
ggtcgctcacgggggtttggatacgtaacgtttgcatcagctgaagatgcaaagaatgca
ttatcaagtgaacactttcttggaaatagaatgctggaagttaaagtggccacaccaaag
gaggagatgagagcacctgcaaagaaagtgacaaggatatttgtggcaaggattccacca
tctgtgactgaagcagcctttcgaaggtcattgaatatgatgatggccgacaaattcttt
cattttgagaaatatggcgatataatagatctgtacatgccaaaggatcatagctcaaaa
acacatcgtggaattggatttatcacattttctagtgcagattctgtggatagtttgatg
gttgatactcatgaactgggaggttctactgtagttgtagatcgagcaacacccaaggaa
gatgatttcaggccagttggaagaatggcacatgttggatacggtgcatacaatgcttat
atctctgcagctactagatatgctgcacttggtgctcctaccttgtatgaccatccaggt
ccaatgtatggaagggaacctgctagaggaatgggcaaaaagatttttgttggcaggctt
cctcaggaagcaactgctgaagatttgcgcctgtatttcggtagatttggtcatatatta
gatgtttatgttccaaaggatcctaagagatctggccatagaggttttggatttgtaaca
tttgctgaagatggtgtagcagatcgtgtttctcgaaggtctcatgagatttgtggacat
caggtagcaatagattcagcaacacctattgatgatgctggcccaagtggaaatttcatg
atgaatgctgctccctcttttgggggttatggtggtcctatgcgcaactttggtaggatg
tatggaagcctggattttgatgattggggttatggaatgggtagtgcaagaccttccaga
gcagattggaggtataggccatactaa
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