Manihot esculenta (cassava): 110628174
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Entry
110628174 CDS
T05761
Name
(RefSeq) centromere/kinetochore protein zw10 homolog isoform X1
KO
K11578
protein transport protein DSL1/ZW10
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110628174
03036 Chromosome and associated proteins [BR:
mesc03036
]
110628174
Membrane trafficking [BR:
mesc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
110628174
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
110628174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zw10_middle
ZW10_C
ZW10_C2
Zw10_N
Dsl1_C
RE_Alw26IDE
Motif
Other DBs
NCBI-GeneID:
110628174
NCBI-ProteinID:
XP_021630389
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Position
12:complement(5774715..5784331)
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AA seq
759 aa
AA seq
DB search
MDALFDAINVRDLLSTGDLTDSTSPLSAPDLRLLITRLESYSLQIKSRVQSYLLSHHSDF
SALFSLCNDAVLQTNQINEKVADLMGLLSNPPVDVEIRAIVEEASAKMREVRVKRQLLEL
VRAIVGISDRLRDVRVALKKGQLKFAAEEVRDLKKALRIGDEDEKDPVVYGLLRKEWLDC
FEEIQDVLVRFMEIAIRFEPNSGGIRVKYRLSMDGIAGVDFHTVLEALEVIGILDYGLAK
VADQMIKFVITPAVNSRSSISFVEDSEKVSGETAEAVLKMVPPFNPKMEDVDGENIYSGI
IQVVKFIYERICFQNVSWNQVFGRLTWTRISDLIISSFLSKAVPEDASKLADFQKIIKVT
SEFENGLKEMKFISATDSTDQKLSNFAENVEIHFATRKKMEILAKARNLLLGCDFSIPQD
YTSEGPPVKSAGLAVNSSEHVVDLLFLSERCVVSKAASQLMELVHKTLQDVCLSSPRVAL
EFYRAARDAMLLYEAVIPVKLERQLDGINQVAVLMHNDCLYLSQEILGLAFEYRSDFPNC
IKEQAVFVDMAPRFHIMSEKILHRQIQLVIFNLKEAIDGADGFQNTHQIKQFESAKFSID
QVVFILEKVRLIWEPLLLPSIYKKSTCIVLESVFSRMVRDILLLDDMAAEETLQLQRLIH
LMLESLTSLMESLTAIIQKEKLEEYSRFPLDDLIPSLCKIRKLAELLDMPLKSIMTAWES
GELLSSGFTTLEVEDFIKAIFADSPLRKECLWRIENVGL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttgttcgacgcgattaacgtccgagacctactgtccaccggcgacctcacg
gactcgacctccccactttctgcccccgatctccgcctcctcataaccaggctcgaatct
tattctctccaaatcaagtccagagtccaatcttacctcctttctcaccacagcgacttc
tcggctctcttctccctctgcaacgacgctgttctacagactaatcaaatcaatgagaag
gtggcggatcttatgggcttgctttctaatcctcctgtggatgttgagattagggcgatt
gttgaggaagcgagtgcgaagatgagggaggtgagggtgaagaggcaactgttggagttg
gtgagggcgatcgtgggaataagtgacaggttaagagatgtaagagtggcattgaagaag
ggacagctgaaatttgctgctgaggaagtaagggacttgaagaaggccttgaggattggt
gatgaggatgagaaggatcctgtggtgtacggcttgttaaggaaggagtggcttgattgc
tttgaagagattcaagatgtgcttgtgaggttcatggaaattgcaatacggtttgagcca
aattctggtggaattcgggtcaagtatcggctgagcatggatggaattgctggggttgac
tttcacacagttttggaagcattggaagtgattggtattttggattatgggcttgctaaa
gtggctgaccagatgatcaagtttgttatcacccctgctgtaaattctcgatcgtctatt
tcatttgtagaagattctgaaaaagtatcaggagaaacagctgaggcagtgttaaagatg
gtaccaccatttaatccaaagatggaagatgtggatggtgagaatatatattcagggatc
attcaggttgtaaagtttatttacgaacgcatatgcttccaaaatgtttcttggaatcaa
gtttttggaagattgacatggaccaggatatctgatttgattatttctagcttcctctcc
aaggcggttcctgaagatgcttcaaaacttgctgactttcagaagatcatcaaagtcaca
tctgagtttgagaatggtttaaaagaaatgaaatttatttcagcaactgatagcacagat
caaaagttgagcaattttgccgaaaacgttgagattcactttgcaactaggaagaagatg
gaaattttggcaaaagctagaaatttgcttttaggatgtgatttttccattccacaagat
tatacaagtgaaggacctccagtgaagagtgctggactagctgtaaattcttctgagcat
gttgttgatttgctctttctatctgagaggtgtgtggtgtccaaagcagcttcccaactt
atggagctagtgcataagacgcttcaggatgtttgtttgtcatctccaagagttgcactt
gaattctatcgtgcagcaagggatgctatgcttctttatgaggctgttattcctgttaag
ctagaaaggcagcttgatggcattaaccaggttgctgttcttatgcacaatgactgtctt
tatctatctcaagagatattaggactggcatttgagtataggtcagacttcccaaattgt
attaaggagcaagctgtttttgttgacatggctccacgatttcatataatgtcagagaag
atattacatagacaaatccaacttgtaatttttaatttgaaagaggccatagatggtgct
gatggttttcagaatactcatcaaatcaaacaatttgagtctgcaaagtttagtatagat
caggtggtttttattcttgaaaaagtacgtcttatatgggagccactgttgctgccatcc
atttacaagaaaagcacatgcatagttttagagtcggttttttctagaatggtgagagac
atacttcttctagatgatatggcagccgaggaaacattacagcttcaaagactcatccat
ctgatgttggaaagcctaacttctttgatggagtccttgactgctatcatccaaaaggag
aagttggaagagtattctagatttcctttagatgatctcataccatctttatgtaaaatt
cgcaaacttgcagaattactcgacatgcccttgaaatccattatgacagcttgggagagc
ggggaacttctcagctctggctttacaacattagaggttgaagatttcattaaagccata
tttgcagattcaccgttgagaaaggaatgcctatggagaatagaaaatgtcggcttgtaa
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