Manihot esculenta (cassava): 110628202
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Entry
110628202 CDS
T05761
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110628202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110628202
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110628202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_16
AAA_22
AAA_28
AAA_14
RNA_helicase
AAA_2
IstB_IS21
AAA_33
AAA_18
nSTAND3
AAA_17
NPHP3_N
Mg_chelatase
Vps4_C
Rad17
Bac_DnaA
NACHT
Parvo_NS1
AAA_3
TsaE
Cytidylate_kin2
ATPase_2
ABC_tran
Viral_helicase1
AAA_19
NB-ARC
Sigma54_activat
AAA_7
Nucleolin_bd
AAA_11
Motif
Other DBs
NCBI-GeneID:
110628202
NCBI-ProteinID:
XP_021630435
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All DBs
Position
12:complement(9850205..9859599)
Genome browser
AA seq
836 aa
AA seq
DB search
MGSGRRKLGGGGGGGGGGGGRNQRLLKFHVDSCKNKFSTADDVVHHLRQHHSNYRRMELR
TLTRLVHQILSSPSPSSSRQPHKSRRSSSASPGLEEGEDEDSIFINPNQFRKKRKRIDES
EERLLQIENDYSKRIDRNLPSTSSSESDSESPPSSSAVSTSEDGIYGEKVEPKIDLMQSM
LRESYAAESKGKEKDKEKNIEVEVASSAKNCNEIDIVNSHKVEEDAERLGANGTKERKGK
GDVSNAKSVEVKGKDGPRFRDLGGMRSVLEELEMEVFLPLYHPHVPRRLGVNPISGILLH
GPPGCGKTKLAHAIATETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTAPSIIFID
EIDAIASKRENLQREMERRIVTQLMTCMDEYHRLVQPANANSDPESSDEKPGNVLVIGAT
NRPDAIDPALRRPGRFDREIRLGVPDENARVEILSVLTRKCTLEGSLDLLQIARSTPGFV
GADLDALVDKAGNLAMRRILSHRKSELTGEYSDREYTEEWWKMPWLPEEIEKLAITMSDF
EQAAKMVQPSSRREGFSTIPNVKWEDVGGLESIRNEFDLHIVRRIKFPEDYQKFGVNLET
GILLYGPPGCGKTLIAKAVANEAGANFIHVKGPEILNKYVGESELAVRTLFGRARTCSPC
VLFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADQRPGVFIIGATNRPEVMDPAVLR
PGRFGKLLYVPLPSPDDRGLILKALAKGKPIDPSVDLSAIGQMNSCENLSGADLKKLMDE
AAMAALVEAKRLSCSDENSCTIKATHFEQALNKISPSVSHKQIQYYKVWSESFKTA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgggatctggaagaagaaagttaggaggggggggcgggggcggaggaggtggcggagga
aggaaccaaagattacttaaatttcacgtggactcgtgcaagaacaaattctcaaccgcc
gacgatgtagtccaccacctccgccagcaccactccaactaccgccgcatggaactccga
accttgactaggcttgttcaccaaattttgagttctccttcaccatcatcatctcgccag
ccccacaaatccagaaggtcttcttctgcttctcccggactagaggaaggggaagatgaa
gatagcattttcatcaatcccaatcaatttcgtaaaaaaaggaagcgaattgatgagagc
gaagagagattgcttcaaatagagaatgattattcgaaaagaatcgatcggaatcttcca
tccacctcctcttccgagtcggactcagagtcaccgccttcttcttctgctgtttcgacg
tcagaggatggaatttacggagagaaagtggagccaaagattgatttgatgcaatcaatg
ttgcgggagagctatgctgctgaatcgaaagggaaagagaaagataaagagaagaatatt
gaagtagaggttgcgagtagtgccaaaaactgtaatgagattgacattgtaaattcgcat
aaagttgaagaagatgcagagagattaggggctaatgggacaaaggaacggaaagggaaa
ggagatgtttcgaatgctaaaagcgtagaggtgaaggggaaggatgggccgagatttagg
gatttagggggaatgcggtcagtattggaggagttggagatggaggtgtttttgcccttg
tatcatccgcatgtgccacggcggcttggagtaaacccgataagtgggattttactgcac
gggccgccgggctgtggcaagaccaaactggctcatgcaattgcaactgagactggagtt
cccttctacaagatttcagctacagaggttgtctccggcgtttctggtgcatctgaagaa
aacatccgagagcttttctccaaagcatacaggactgcaccatcaattattttcatagat
gagattgatgcaattgcttcaaagagagaaaacctacagagggagatggagcgaaggatt
gtaacacaattaatgacttgcatggatgaatatcacagacttgttcaaccagccaatgca
aattcagacccagagagctctgatgaaaaacctggcaatgttcttgtaattggagctact
aataggcctgatgctattgaccctgcactgaggaggcctggaagatttgatcgtgagatt
aggttaggtgtcccagatgagaatgctagggttgagattctttcggtccttactagaaaa
tgtactcttgagggttctcttgatcttttgcaaatagcaaggtctacgccaggatttgtt
ggagctgacttggatgctttagttgacaaggctggtaatcttgccatgaggagaatcctt
tcccatagaaagtctgagcttactggagaatactccgacagggaatacactgaagaatgg
tggaagatgccttggttgcctgaggagattgaaaagcttgccattacaatgtctgatttt
gagcaagcagctaagatggttcagccctcttcaagaagagaaggattttctaccattcct
aatgtgaaatgggaagatgttggtgggcttgaatctataagaaatgagtttgaccttcat
atagttaggcgcataaaatttcctgaagattatcagaaatttggagtgaatttagagact
ggaattttgctttatggccctccaggctgcggtaaaacactgatagccaaggctgttgca
aatgaggcaggagctaatttcattcatgtcaagggtcctgaaattctgaataaatatgtt
ggagaaagtgaactggcagttcgtacattatttggtcgtgcaaggacatgttcaccgtgt
gtacttttctttgatgaggtggatgctttgacaacgaagcgtgggaaagaagggggctgg
gttgttgagcggttgctaaaccagttacttatagagttagatggtgcagatcagcggcct
ggtgttttcataattggtgcaactaacagacctgaggtgatggaccctgctgtcttgcga
cctggaaggtttggaaagcttctttatgtacctctgcccagtccagatgaccgtggattg
atcttaaaggctcttgcaaagggaaaacctattgatcccagtgtagatttgagtgccatt
ggtcagatgaattcatgtgaaaatttaagcggagctgatcttaagaagctgatggatgaa
gctgcaatggctgcattagttgaagcaaaaagattgagctgctcagatgagaactcatgc
acaatcaaggcaactcatttcgagcaagcattaaataaaatttctccttctgtgtcgcac
aagcaaatacagtactacaaggtttggtcagagagcttcaaaactgcatga
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